Linux Software / Programming / Development Editors

t2prhd 2.0

Company: sbotond

Date Added: September 06, 2013 | Visits: 364

Report Broken Link
Printer Friendly Version

Product Homepage
Download (37 downloads)

t2prhd is a Perl script which generates simple diagrams that highlight relationships of sequence repeats detected by using a profile HMM in two sequences. Homology relations are identified on the basis of the phylogeny of repeats.

Requirements: No special requirements

Platforms: *nix, Linux

Keyword: Basis, Detected, Homology, Identified, Phylogeny, Profile, Relations, Repeats, Sequences

Users rating: 0/10

License: Freeware

Size: 133.12 KB

USER REVIEWS

More Reviews or Write Review

T2PRHD RELATED

Science - t2prhd 2.0 t2prhd is a Perl script which generates simple diagrams that highlight relationships of sequence repeats detected by using a profile HMM in two sequences. Homology relations are identified on the basis of the phylogeny of repeats.	129.98 KB
Networking Tools - Network Profile Manager Lite 6.5 The free NPM Lite version has been developed for individuals that find themselves constantly changing Internet settings to access the internet. With NPM 2014 Lite you can create network profiles that match your frequently used locations (home,...	4.78 MB
Networking - Social Access Control 1.1 Based on the 3rd-party Category Access, this plugin provides the core functionality for restricting the access permissions of posts. This gives you the ability to permit only specific registered users to read certain posts or certain categories of...	10 KB
E-Mail Tools - Repair DBX Files Tool 1.0 Repair DBX Files Tool is the market leading tool for how to repair Outlook dbx files and get your emails and information back fast! Repair DBX Files Tool is powered by our cutting edge error detection algorithm combined with our comprehensive...	1.1 MB
Libraries - MyCGR 0.98 MyCGR is an Objective-Caml library and a collection of tools to use the Chaos Game Representation on DNA sequences. MyCGR can empirically check the level and power of the tests and apply them on DNA sequences. It can generalize the...	1.8 MB
Development Editors - FFP-Feature Frequency Profile Phylogeny 3.13 FFP (Feature frequency profile) is an alignment free comparison tool for phylogenetic analysis and text comparison. It can be applied to nucleotide sequences, complete genomes, proteomes and even used for text comparison.	215.04 KB
Libraries - Relations 0.95 Relations is a Perl module with functions to use with databases and queries. SYNOPSIS use Relations; $as_clause = as_clause({full_name => "concat(f_name, ,l_name)", {status => "if(married,Married,Single)"}) $query = "select $as_clause...	18.43 KB
Libraries - Devel::Profile 1.04 Devel::Profile is a Perl module to tell me why my perl program runs so slowly. SYNOPSIS perl -d:Profile program.pl less prof.out The Devel::Profile package is a Perl code profiler. This will collect information on the execution time of a...	7.17 KB
Libraries - Params::Profile 0.10 Params::Profile is a Perl module for registering Parameter profiles. SYNOPSIS package Foo::Bar; use Params::Profile; ### Single profile Params::Profile->register_profile( method => subroto, profile => { testkey1 => { required => 1 },...	6.14 KB
Libraries - Relations::Family 0.94 Relations::Family is a DBI/DBD::mysql Relational Query Engine module. SYNOPSIS # DBI, Relations::Family Script that creates some queries. #!/usr/bin/perl use DBI; use Relations::Family; $dsn = "DBI:mysql:finder"; $username = "root";...	50.18 KB

NEW DOWNLOADS IN PROGRAMMING, DEVELOPMENT EDITORS

Programming - Cedalion for Linux 0.2.6 Cedalion is a programming language that allows its users to add new abstractions and define (and use) internal DSLs. Its innovation is in the fact that it uses projectional editing to allow the new abstractions to have no syntactic limitations.	471.04 KB
Programming - Math::GMPf 0.29 Math::GMPf - perl interface to the GMP library's floating point (mpf) functions.	30.72 KB
Programming - Net::Wire10 1.08 Net::Wire10 is a Pure Perl connector that talks to Sphinx, MySQL and Drizzle servers. Net::Wire10 implements the low-level network protocol, alias the MySQL wire protocol version 10, necessary for talking to one of the aforementioned...	30.72 KB
Programming - logilab-common 0.56.2 a bunch of modules providing low level functionnalities shared among some python projects devel Please note that some of the modules have some extra dependencies. For instance, logilab.common.db will require a db-api 2.0 compliant...	174.08 KB
Programming - OpenSSL for linux 1.0.0a The OpenSSL Project is a collaborative effort to develop a robust, commercial-grade, full-featured, and Open Source toolkit implementing the Secure Sockets Layer (SSL v2/v3) and Transport Layer Security (TLS v1) protocols as well as a...	3.83 MB
Development Editors - KMood 0.30 kmood is a tool for KDE which lets the user to select his current mood. Moods canbe propagated between users on different machines using KDE.	389.12 KB
Development Editors - File Sift 1.0 File Sift groups files and directories to fit within a specified size threshold. This is useful when backing up to media of fixed size (ie cd-r media), and helps maximize the use of space on that media. Provides both graphical and command line...	2.53 MB
Development Editors - GNUsTicker 0.1 GNUsTicker is basically a RSS aggregator. It is a GNOME panel applet that scrolls infos retrieved from RSS, RDF, etc. It may be extended for feeding from different sources (an example for POP3 mail server is provided).	819.2 KB
Development Editors - sarface 0.8 sarface is a user-interface to the sysstat/sar database which inputs data from sar and plots to a live X11 graph via gnuplot. It mimics the cmd-line options from sar but can cross-plot any two or more stats and apply simple mathematical functions...	327.68 KB
Development Editors - Hachikaduki 0.9.2 Hachikaduki is a simple knowledge management tool for knowledge workers. Hachikaduki enables you to manage text-based Knowledge. Hachikaduki has a powerful full-text search function. You can find Knowledge quickly and easily	2.26 MB

Windows Software	BeOS Software
Macintosh Software	Linux Software
PDA Software	OS/2 Software
Mobile Software	Scripts