Genomic Cloning Peroxidase Gene

openSputnik is a robust distributed platform for massive scale precalculation of genetic and genomic data using contemporary bioinformatics methods. Annotated DNA, RNA and protein sequences are stored as binary objects in a variery of relational database Platforms: Windows, Mac, Linux

The Program to Assemble Spliced Alignments (PASA) is used to automatically incorporate ESTs and full-length cDNAs into gene structure annotations, in the process annotating UTRs, alternative splicing variations, and polyadenylation sites. Platforms: Mac, BSD, Linux

PerlPrimer is a free, open-source GUI application written in Perl that designs primers for standard PCR, bisulphite PCR, real-time PCR (QPCR) and sequencing. It aims to automate and simplify the process of primer design.PerlPrimer's current features include the following: - Calculation of... Platforms: *nix, Perl, BSD

RmiR is an R package for the analysis of microRNA and gene expression microarrays.The package is designed to coupling microRNA and gene expression data, using different databases, like TargetScan, mirBase, picTar,TarBase and others... Platforms: Windows, Mac, Linux

RssGsc (Rank Sum Statistics for Gene Set Collections) is a bioinformatics tool used to find meaningful gene sets using a ranked list of genes (obtained form an experiment). Platforms: Windows, Mac, Linux

Add-on to Haploview that picks tagSNPs while allowing for: (1) preferential selection based on user-defined criteria, (2) selection across multiple populations, (3) selection outside defined genomic regions, and (4) picking of surrogate (backup) tagSNPs. Platforms: Windows, Mac, Linux

SnoopCGH is a java desktop application for visualising and exploring comparative genomic hybridization (CGH) data. Platforms: Windows, Mac, Linux

SysGenSIM is a bioinformatics toolbox to create artificial gene expression datasets by simulating Systems Genetics experiments. Platforms: *nix

Mac OS X's installation media includes a number of very useful tools for resetting passwords, diagnosing hardware issues, cloning drives, copying data, checking and repairing filesystems, managing disks, and even conducting forensics if you're so inclined. However, there are a number of... Platforms: Mac

This script is an implementation of the prototype pattern. In the prototype pattern you create a new instance cloning from other. Platforms: Windows, Mac, *nix, Python, BSD Solaris

OmicBrowse, developed with Flash and Java, is a highly evaluated genome browser integrating omics knowledge ranging from genomes to phenomes and is especially appropriate for positional-cloning purposes. Platforms: Windows, Mac, *nix, Flash, BSD Solaris

In one type of gene expression analysis, fluorescently tagged messenger RNA from different cells are hybridized to a microscopic array of thousands of complimentary DNA spots that correspond to different genes. Illuminated spots emit different color light, indicating which genes are expressed... Platforms: Matlab

This user interface allows a user to load some Affymetrix data in an Excel file and perform some basic operations on it - log transform, log ratio, normalization, noise reduction, filtering, PCA and clustering, in addition to some visualizations like profile plots, boxplots and matrix... Platforms: Matlab

MCGH is a Matlab toolbox with graphical interface to analysis DNA microarray-based comparative genomic hybridization (CGH) experiments. CGH on DNA microarray enable us to measure the copy numbers of thousands of genes through the genome. M-CGH allows us to visualize the copy number changes... Platforms: Matlab

GETHGVBASE returns polymorphism data from the human genome variation db http://hgvbase.cgb.ki.seHGVDATA = gethgvbase(SNPID) reads in a %hgvbase web record fromEMBL and creates a structure DATA %containing fields correspondingto the hgvBase keywords.FIELDNAME DESCRIPTIONS: a complete %description... Platforms: Matlab

General implementation of matlab version of Viterbi algorithm specifically written for gene structure finding problem in mind. However, it can be modified to suit the goal of a user.Input:Transition Probability MatrixEmission Probability MatrixInitial Probability MatrixStates Matrix (ie.... Platforms: Matlab

The motivation for this demo is that if you have an instance (say 'a') of a custom class that subclasses 'handle', then the command 'b = a;' will produce another reference 'b' to the same object as initially referenced by 'a', effectively creating a 'shallow' copy of the object.The link to this... Platforms: Matlab

Features Clone is a Drush command that allows quick cloning of a Feature. It can be used to rename or fork (e.g. to start a new feature off of an existing one) a Feature installed on a Drupal site.Usagedrush features clone Arguments:src_featurename - Required. Modulename (machine name) of the... Platforms: PHP

This is perhaps quite a niche module, it's a node cloning helper - hopefully someone will find it useful... It allows an admin to select; * A CCK field which has more than one "Number of values" set for use * A single entry CCK field which the module will populate with the multiple entry field... Platforms: PHP

This module allows you to clone entire menus, much like Node clone does with nodes.Next to the basic menu properties such as Menu name, Title and Description, the clone form allows you to customise the menu itself before cloning it.The optional Internationalization (i18n) module together with the... Platforms: PHP