Molecular Interaction

GMDR was built as an Open-Source interaction analysis instrument that is aimed to perform gene-gene interaction with generalized multifactor dimensionality methods. This Java-based tool offers a generalized combinatorial approach for detecting gene-by-gene and gene-by-environment interactions. Platforms: Windows, 2K, XP, Windows Vista, 7

PaDEL-Descriptor is a handy utility designed to perform molecular calculation. It calculates 797 descriptors (663 1D, 2D descriptors and 134 3D descriptors) and 10 types of fingerprints. Platforms: Windows

Uses a unique mobile client/serverbased technology to provide multi-user applications that runs on a server and are used from mobile devices. The suite consists of a server, a graphical development tool and a MIDlet that is downloaded to the target phones. The Strike Server is a development... Platforms: Mac

GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles. It is primarily designed for biochemical molecules like proteins, lipids and nucleic acids that have a lot of complicated bonded... Platforms: Mac, Linux

FreeDiams prescriber is the result of FreeMedForms prescriber plugins built into a standalone application. FreeDiams is a multi-platform (MacOS, Linux, FreeBSD, Windows), free and open source released under the GPLv3 license. It is mainly developed by medical doctors and is intended for use by... Platforms: Mac

FreeDiams prescriber is the result of FreeMedForms prescriber plugins built into a standalone application. FreeDiams is a multi-platform (MacOS, Linux, FreeBSD, Windows), free and open source released under the GPLv3 license. It is mainly developed by medical doctors and is intended for use by... Platforms: Windows

ixiQuarks is a software environment designed for live improvisation that allows for user interaction on hardware, GUI and code level. The environment enables innumerable setups with flexible loading of tools and instruments. The ixiQuarks consist of different types of tools: basic utilities,... Platforms: Mac

This script provides user interaction with images saved in a .SVG format. What's New in This Release: - Several minor fixes, including a rewrite of the getScreenTCM() Platforms: Windows, Mac, *nix, JavaScript, BSD Solaris

OPT is the single point of contact for all customer interaction for a project. Each customer is registered with a login and password, and granted access only to the projects they're involved with. They can then see the project status at a glance, including a repository of documents, lists of... Platforms: Windows, Mac, *nix, PHP, BSD Solaris

One must input to a dialog box Antoine's constants, Wilson binary interaction parameters and liquid molar volume of any binary mixture of his choice. The program computes and plots activity coefficients, relative volatility and VLE diagram. Platforms: Matlab

This m-file gives the atomic weight of any element or molecular weight of any chemical species.Input:species = (cell array)The species is the 'formula'.Output:Atomic weight of any element or molecular weight of any chemicalspecies. Platforms: Matlab

This is set of functions that allow opening of Molecular Imaging atomic force microscope files into Matlab matrix. Unzip the files in one directory and type in Matlab command prompt:y=ReadSTP('pathfilename.stp',buffer number).Matrix y will contain z values of measured surface. Comments will show... Platforms: Matlab

BaseDB is the excellent oo base class for mysql interaction. worth looking at. You must use this as a base class and extend your classes which map to a table name.Your tables must have a 'id', 'created' and 'modified' field to work properly and the class takes care of the rest. check it out. Platforms: PHP

ClassSimple aims to provide an online platform for student-teacher interaction while being as simple to manage as possible.Features include, online documents, grades, and multiple-choice tests. Platforms: PHP

Pari passu is a Latin phrase that literally means "equal footstep" or "equal footing." It is sometimes translated as "part and parcel," "hand-in-hand," "with equal force," or "moving together," and by extension, "fairly," "without partiality."This plugin was created to facilitate your life when... Platforms: PHP

as3Glue gives Flash, Flex and AIR applications physical interaction capabilities. Platforms: PHP

Wrapper classes for the commandline 'dialog' program to allow easier user interaction for commandline PHP scripts. Hopefully other dialog programs (xdialog, zenity etc.) will be supported in the future. Platforms: PHP

pISTil (a Pipeline for Interaction Sequence Tag identification and analysis) is a collection of scripts, and programs - running on both Linux and MacOS X systems - for fast analysis of large yeast two-hybrid sequence datasets. Platforms: Mac

The PSI3 suite of quantum chemical programs is designed for efficient, high-accuracy calculations of properties of small to medium-sized molecules. The package's current capabilities include a variety of Hartree-Fock, coupled cluster, complete-active-space self-consistent-field, and... Platforms: Mac

Path-O-Gen is a tool for investigating the temporal signal and 'clocklikeness' of molecular phylogenies. It can read and analyse contemporaneous trees (where all sequences have been collected at the same time) and dated-tip trees (where sequences have been collected at different dates). It is... Platforms: Mac