Alignments

This 30 days fully functional demo of CLC DNA Workbench provides a wide range of advanced DNA sequence analyses, and is based on the same user-friendly and integrated software environment as CLC Free Workbench. Some analyses are: - Assembly of DNA sequencing data - Graphically and... Platforms: Mac

Reads and writes Excel files (xls) without Microsoft Excel. Supports cells formatting: alignments, borders, colors, fill patterns, fonts etc. It works with large sheets and has a high performance. - fixed bug with opening xls in Numbers - read/write from/to memory buffer - copying sheets and cells Platforms: Mac

Brings the world of comic books alive in this massively multiplayer 3D online universe. Craft your hero's identity and join millions of Hero characters in a constantly expanding universe, explore the sprawling online metropolis of Paragon City, and battle a host of foes including criminals,... Platforms: Mac

drawing and drafting done without worrying about how to run their software. Create 2D and 3D precision wireframe drawings of unlimited complexity and detail. Whether you need a simple sketch, an elaborate architectural design or a precision engineering drawing, Graphite lets creative... Platforms: Mac

Modeling package, offers supreme design flexibility and speed at a moderate price. Xenon lets creative people work freely without worrying about their software. It is especially for those doing highly stylized concepts with a great degree of customization. Using Ashlar-Vellums unique paradigm of... Platforms: Mac

Matches professional power with speed and ease-of-use for flexible, precision 3D modeling. It lets creative people work without worrying about their software. Designers save time and money using Ashlar-Vellums Organic Workflow by moving quickly from conception through completion in the real world... Platforms: Mac

Enter the world of 3D modeling with more power and accuracy. Argon is for those needing precision 3D without parametric history getting in the way. Its hybrid solid and surface modeling capabilities provide unmatched flexibility in shape design combined with data accuracy equal to any other... Platforms: Mac

Creates a software environment enabling users to make basic bioinformatics analyses and smooth data management, combined with excellent graphical viewing and output options. Some bioinformatics features are: - GenBank searching and viewing (linear and circular views) - Multiple alignment of... Platforms: Mac

A modular software framework for phylogenetic analysis and visualization. Existing phylogenetic software can be split into two groups. Algorithmic packages that provide computational methods for a specific problem, and visualization tools to analyze results. Many algorithmic tools lack in... Platforms: Mac

FOX is a C++ based Toolkit for developing Graphical User Interfaces easily and effectively. It offers a wide, and growing, collection of Controls, and provides state of the art facilities such as drag and drop, selection, as well as OpenGL widgets for 3D graphical manipulation. FOX also... Platforms: Windows, Linux

CLC Sequence Viewer creates a software environment enabling users to make a large number of bioinformatics analyses, combined with smooth data management, and excellent graphical viewing and output options. Bioinformatics features in CLC Sequence Viewer Multiple alignment of DNA, RNA, and... Platforms: Windows

The Photo Gallery for Dreamweaver allows to add image gallery to your website, quickly and easily, directly in Dreamweaver 8, CS3 or CS4 (Flash is not required). Unlimited levels of albums/folders/categories, browse mode with intuitive navigation and preview, search feature, view mode with... Platforms: Windows, Mac

The aim of the BioWeka project is to add bioinformatics functionalities such as e.g. alignments to the popular machine learning framework Weka. Platforms: Windows, Mac, Linux

GATA is a graphic alignment tool for comparative sequence analysis. It makes use of BLAST to graphically align two DNA sequences, creating box- line- box representations of window scored local alignments. GATA also displays extensive GFF gene annotation. Platforms: Windows, Mac, Linux

MatrixGen is a Bioinformatics application used to generate scoring matrices from analysis of aligned Amino Acid and DNA data sets. These matrices can then be used by Clustal to generate more accurate alignments. Based upon the Henikoff BLOSUM method. Platforms: Windows, Mac, BSD, Linux

Bio::Prospect:: is a Perl API to thePROSPECT threading application. The modules provide for programexecution, results parsing, multiple sequence alignments inferred frompairwise sequence-structure alignments, and rudimentary homology models. Platforms: Windows, Mac, Linux

pygr is a bioinformatics toolkit for sequence analysis and comparative genomics. pygr is highly scalable (e.g. one can easily query multi-genome alignments) and easy to use. Please see our new project page and wiki at http://code.google.com/p/pygr. Platforms: Windows, Mac, Linux

VINE is a vocabulary Integration Environment Tool, developed at MMI. It allows to create fast mappings and alignments from ontologies in OWL. VOC2OWL is a tool to create ontologies from ASCII files. They are both JAVA based and are delivered as a Rich Cl Platforms: Windows, Mac, Linux

BlastViewer provides an interactive graphical user interface for the analysis of the reports produced by the BLAST sequence database search system. BlastViewer is an easy to use software designed for everyday biological sequence analysis relying on BLAST. It allows an easy visualisation and... Platforms: Mac, Java 1.5 or later

createTable creates a 2D java-based table that enables display, editing and sorting of 1D and 2D data using familiar look-and-feel. Columns can be resized and sorted; data can be selected, printed, copied, pasted etc., including to/from Excel; Rows can be added/deleted; Columns can have different... Platforms: Matlab