Users load multiecho MRI data and draw ROIs. AnalyzeNNLS creates a T2 distribution from the averaged decay data. Regional fractions and geometric T2 times can be determined. Please reference: Bjarnason TA, Mitchell JR. JMR 206:200-4 (2010).

AnimaBob is an interactive volume rendering tool for generating movies using OpenGL, from a set of dynamic volume data.

'animal-imaging' is a project to collect and disseminate information on imaging technologies (e.g. CT, MRI, PET, ultrasound) pertinent to the vivo imaging of animals.


Platforms: Windows, Mac, Linux

Anna is lightweight Java framework to build pipeline systems of any kind. It will take care of recurrent needs such as dependency management, data serialisation and synchronization as well as parallelization of execution.


Platforms: Windows, Mac, Linux

AnnaF is an automatic gene annotation framework, that is used to do some automatic annotation for C. higginsianum. It was also tested on F. graminearum and should work well for fungi in general. AnnaF was build upon the pipeline framework Anna.


Platforms: Windows, Mac, Linux

Simple program for artificial neural network users. Right now the program can manipulate with Feed forward back propagation network.


Platforms: Windows, Mac, Linux

Annotated Gel Markup Language is a simple markup language that is being proposed to markup data obtained by 2D gel electrophorosis.The goal of AGML is to enable proteomics research move into the browsing mode of searching through existing databases.


Platforms: Windows, Mac, Linux

AnnTools is an efficient, fast and robust bioinformatics tool annotating SNP and CNV calls generated from sequencing and microarray data.


Platforms: BSD, Mac, Linux

Annual Meteor Showers is an interactive database of more than 50 meteor showers, including an editor to customize the database and enter new data.


Platforms: Mac

This project develops a simple, fast and easy to use Python graph library using NumPy, Scipy and PySparse.


Platforms: Windows, Mac, Linux

Set of Ant filters that can be used to gather statistics from files or resources. It is mainly used for log files analysis. It allows to: - count inputs - count occurrences of each input - calculate average, max and min values of floats in input


Platforms: Windows, Mac, Linux

Antimony is a human-readable, human-writable model definition language. libAntimony is a library that will read and write Antimony and SBML files and provides an API for other programs to import Antimony models into their own internal formats.


Platforms: Windows, Mac, Linux

ANts P2P realizes a third generation P2P net. It protects your privacy while you are connected and makes you not trackable, hiding your identity (ip) and crypting everything you are sending/receiving from others.


Platforms: Windows, Mac, Linux

Advanced Online Surveys for a sophisticated market research and other kinds of professional data collection by using the world wide web.The potential for charmelionic data analysis and aquisition of additional data distinguishes it from other products.


Platforms: Windows, Mac, Linux

Apex is a software architecture and development toolkit for creating intelligent, autonomous agents. Applications for such agents range from control of robots to mission planning, usability analysis, and simulation-based training of human operators.


Platforms: Windows, Mac, Linux

The package generates a feature table from a batch of LC/MS spectra in .cdf format. Instructions: http://www.sph.emory.edu/apLCMS/ References Bioinformatics. 25(15):1930-36. BMC Bioinformatics. 11:559.


Platforms: Windows, BSD, Mac

APLpy (the Astronomical Plotting Library in Python) is a Python module aimed at producing publication-quality plots of astronomical imaging data in FITS format. Visit http://aplpy.sourceforge.net/ for tutorials and documentation.


Platforms: Mac, Linux

Algorithms to estimate the number of k-colorings of a low-degree graph using samplings from a markov chain are provided.


Platforms: Windows, Mac, Linux

Advanced Quality Assurance for Aerometric-Data (AQUA) is an open-source quality assurance platform for wind resource data. Developed and currently maintained by the Wind Energy Center at the University of Massachusetts. See www.umass.edu/windenergy


Platforms: Windows, Mac, Linux

AquaTerm is a Mac OS X grahics renderer. It allows command line applications written in ObjC, C, FORTRAN, Lisp, Perl or Python to display vector graphics, text and images using a simple API. Adapters for gnuplot, PGPLOT, and PLplot exists as well.


Platforms: Mac