Macintosh Software / Education / Science

PathVisio 2.0.9

Company: BigCaT Bioinformatics, Maastricht University

Date Added: June 15, 2013 | Visits: 362

Report Broken Link
Printer Friendly Version

Product Homepage
Download (35 downloads)

PathVisio is a tool for displaying and editing biological pathways. In a sense PathVisio lets you draw pathways as you would in any drawing program, like PowerPoint or Photoshop. But the difference is that PathVisio can understand the biological context of a pathway, because you can link biological entities (genes or proteins) in your pathways to biological data using database identifiers. This will let you map experimental data (e.g. microarray data) and visualize it on top of the pathway drawing. Note: mapping experimental data is not yet a feature of PathVisio 1.1, but you can do this in combination with GenMAPP or with additional plug-ins for PathVisio).

Requirements: No special requirements

Platforms: Mac, Mac OSX

Keyword: Additional, Biological, Combination, Database, Drawing, Experimental, Feature, Genmapp, Identifiers, Mapping, Microarray, Pathvisio, Pathway, Pathways, Plugins, Proteins, Visualize

Users rating: 0/10

License: Freeware

Size: 10.24 KB

USER REVIEWS

More Reviews or Write Review

PATHVISIO RELATED

Business - Weblook Webmail 0.9.4.rc2 Web based e-mail client written in PHP using a MySQL database, that is feature rich including Contacts, Calendar, Notes, Tasks and of course e-mail. Weblook is intended to provide users with a web based application to manage their busy lives.	107.5 KB
Programming - SpyLord 1.3 A multi-platform (i86,mac,sparc)Generic Database Connection API including Object-Relation mapping, 80/20 protocol, Connection Pooling	65.02 KB
Programming - WordNetScope 1.0.2.20110914 WordNet Browser using SQL database and Hibernate as Object-Relational Mapping	63.67 MB
Database Tools - Doctrine Migrations 2.0 The Doctrine Migrations offer additional functionality on top of the database abstraction layer (DBAL) for versioning your database schema and easily deploying changes to it. It is a very easy to use and powerful tool.To use the Migrations as...	102.4 KB
Chat - IRC PHPbot for Scripts 1.22 IRC PHPbot is an IRC bot coded in PHP using MySQL for its database system.It will support the commonly used IRC commands as well as others. It can easilly be extended with additional commands. It is coded so it is easy to create your own commands...	71.68 KB
Blog - b2evolution 2.4.2 b2evolution is a powerful blog tool you can install on your own website. b2evolution includes all the features of traditional blog tools, and extends them with evolved features such as advanced skinning, multiple blogs support, file and photo...
Image Galleries - Skencil 0.6.17 Skencil is a Free Software interactive vector drawing appliction. Known to run on GNU/Linux and other UNIX-compatible systems, it is a flexible and powerful tool for illustrations, diagrams and other purposes. A somewhat unique (for a drawing...
Blog - EZPX 1.2 beta EZPX is a free lightweight photoblog engine having all the features you'd need and a user interface you'll love to use. feature : * a free photoblog application (blog engine) * written in PHP 4 (using Codeigniter framework) * driven by MySQL...	2.77 MB
Education - Sketch for Linux 0.6.17 Skencil is a Free Software interactive vector drawing appliction. Known to run on GNU/Linux and other UNIX-compatible systems, it is a flexible and powerful tool for illustrations, diagrams and other purposes. A somewhat unique (for a...	583.68 KB
Database Tools - SQLTools 1.4 build 28 SQLTools is a light weighted and robust tool for database development. It includes a text editor, an sql console and a couple of sql utilities. You can use it for dial-up connection and it will work as fast as SQLPlus. It is small and not required...	860 KB

NEW DOWNLOADS IN EDUCATION, SCIENCE

Education - Sliding Down an Incline Plane Model 1.0 This interactive simulation shows a stone block lying at rest on an inclined plane. Initially, the component of gravity along the plane surface is exceeded by the force of static friction. The slope of the ramp can be increased or decreased,...	51.2 KB
Education - MrAIC 1.4.4 MrAIC.pl is a Perl script for calculating AIC, AICc, BIC, and Akaike weights (for a review, see Burnham and Anderson, 2002) for nucleotide substitution models. Likelihood scores under different models are estimated using PHYML (Guindon and...	10.24 KB
Education - Three Charges 1.0 In this simulation, you can investigate the idea of the force between charged objects. Initially, the simulation sets up three charged objects, one at each corner of an equilateral triangle. The charges have different magnitudes - your job is to...	1.36 MB
Education - AWclust 3.0 AWclust is easy to use non-parametric population structure analysis software written for R with a GUI interface. Just point and click and you will be on your way to discovering the important cluster information in your SNP data sets.	20.48 KB
Education - BEAGLE/BEAGLECALL Scripts Package 1.0 These scripts are for importing and exporting files from the BEAGLE and BEAGLECALL Genetic Analysis Software Packages	317.44 KB
Science - Multiple beam interference 1.0 This applet shows multiple beam interferences from a parallel dielectric thin film. The applet lets you study the evolution of reflection and refraction factors when the index of refraction and the absorption of the film and the substrate are...	10.24 KB
Science - Point Charge Forces in 2D Model 1.0 The Point Charge Forces in Two-Dimensions model investigates the electric force that a charged particle experiences in a two-dimensional situation, because of four other nearby charged particles. The net electric force is shown as an arrow...	1.36 MB
Science - Lennard-Jones PVT System Model 1.0 The Lennard-Jones PVT System simulates a two-dimensional system of particles confined between a thermal reservoir and a piston. This computer model is designed to study the equation of state for particles interacting via a simple but realistic...	962.56 KB
Science - Ideal Fermi Gas Integral 1.0 The STP IdealFermiGasIntegral program numerically determines the value of the chemical potential of an ideal Fermi gas for a given temperature and density. STP IdealFermiGasIntegral is part of a suite of Open Source Physics programs...	476.16 KB
Science - JiveX DICOM Viewer 4.4 The DICOM Viewer is available as a free Personal Edition for non-commercial usage. This version is limited in its functionality and can only be used for a limited period of time. Note: This version expires on 2012-01-01. Before...	25.55 MB

Windows Software	BeOS Software
Macintosh Software	Linux Software
PDA Software	OS/2 Software
Mobile Software	Scripts