Protein Analysis

The JPAT API is a Java API designed to provide developers with tools for calculating the results of protease digestion of proteins and ms/ms fragmentation of peptides. JPAT also contains GUI components for displaying the results. JPAT is a nice way to get Platforms: Windows, Mac, Linux

TMRPres2D or TransMembrane protein Re-Presentation in 2 Dimensions for long, is a small, easy to use application designed to automate the creation of uniform, two-dimensional, high analysis graphical images/models of alpha-helical or beta-barrel transmembrane proteins. Protein sequence data and... Platforms: Windows

ProDy is a free and open-source Python package for analyzing protein structural dynamics. It allows for quantitative analysis of heterogeneous experimental structural datasets and comparison with theoretically predicted conformational dynamics. The input for ProDy is the atomic coordinates of... Platforms: *nix

CLC Protein Workbench is a scientific application for bioinformation, aimed at the advanced analysis of protein sequences. This program offers you a really wide range of analyses, all of them integrated in the same interface, which is very friendly and accessible to all users.The options and... Platforms: Windows

User friendly PDB (Protein Data Bank) file editor with graphic user interface for protein crystallographers to expedite selective parallel edit / data extraction / analysis of their PDB files Platforms: Windows, Mac, Linux

HOPPscore is a simple application for evaluating the structural quality of theoretical or experimental protein structures. Protein are evaluated by comparing structure fragments to a reference dictionary of fragments from high resolution structures. Features . Protein Structure Quality... Platforms: *nix

Stock Price Analysis provide a free web based stock price analysis module. The easy to use interface incorporates Fundamental Analysis to calculate: Fair Value stock price; comparative stock Value; profit Target sell price; Stop Loss sell price; Price Earnings Ratio (PE) for Fair Value and Buy... Platforms: Windows, Mac

BASE is the Basic Analysis and Security Engine. It is based on the code from the Analysis Console for Intrusion Databases (ACID) project. This application provides a web front-end to query and analyze the alerts coming from a SNORT IDS system. BASE is a web interface to perform analysis of... Platforms: *nix

Market Analysis System (MAS) is an open-source software application that provides tools for analysis of financial markets using technical analysis. Market Analysis System provides facilities for stock charting and futures charting, including price, volume, and a wide range of technical analysis... Platforms: *nix

Directory Analysis Tool is used to analyze LDAP directories and report on their contents. Useful if you want to find inactive accounts, people who havent changed passwords, or who has administrator privileges.. Platforms: *nix

TA-Lib provides common functions for the technical analysis of stock/future/commodity market data. TA-Lib can be reused by trading software developers using Excel, .NET, Java, Perl or C/C++.. Technical analysis open-source software library to process financial data. Provides RSI, MACD,... Platforms: *nix

Statistical Traffic Analysis Kit is a set of command-line traffic analysis tools, designed to help a network administrator to see what is happening at a router at the moment. Unlike tcpdump (1), the stak set uses statistical and stream-oriented methods, and will rarely produce an output stream... Platforms: *nix

The Analysis & Reconstruction Sound Engine also known as ARSE, is a program that analyses a sound file into a spectrogram and is able to synthetise this spectrogram, or any other user-created image, back into a sound. The ARSE consists in two main parts, a spectrographer with a base-2... Platforms: *nix

Plucene::Analysis::PorterStemFilter - Porter stemming on the token stream. SYNOPSIS # isa Plucene::Analysis:::TokenFilter my $token = $porter_stem_filter->next; This class transforms the token stream as per the Porter stemming algorithm. Note: the input to the stemming filter must... Platforms: *nix

Sequence Analysis project is a collage of coding projects which I have written over the past several years for various clients in my work as a bioinformatics consultant. These clients have graciously allowed me to release these works into the public domain as freeware for Macintosh OS X in... Platforms: *nix

AutoFEM Analysis Lite is a free system of finite-element analysis. The main feature of the system is its deep integration with AutoCAD. Using AutoFEM Analysis Lite each user of AutoCAD gets possibility to solve the problems of finite-element modeling of various physical phenomena: - static... Platforms: Windows

Rocket Propulsion Analysis (RPA) is a multi-platform rocket engine analysis tool for rocketry professionals, scientists, students and amateurs. For many years rocketry scientists, students and amateurs were using command-line MS-DOS or UNIX programs to calculate the performance of the rocket... Platforms: Windows

Rocket Propulsion Analysis (RPA) is a multi-platform rocket engine analysis tool for rocketry professionals, scientists, students and amateurs. For many years rocketry scientists, students and amateurs were using command-line MS-DOS or UNIX programs to calculate the performance of the rocket... Platforms: Windows

Main Workbench includes all features from CLC DNA Workbench, CLC RNA Workbench, and CLC Protein Workbench, as well as a range of Gene Expression Analysis. CLC Main Workbench creates a software environment enabling users to make a large number of advanced protein sequence analyses, combined with... Platforms: Windows, XP, Windows Vista, XPX64, 7, 7x64

Cluster Sampling Analysis was specially designed in the Java programming language to help you compute your data. Now you can make use of this handy and accessible application to analyze your cluster samplings in no time at all. Platforms: Windows