Genome Visualization

GenomeView is a next-generation stand-alone genome browser and editor initiated in the BSB group at VIB and currently developed at Broad Institute. It provides interactive visualization of sequences, annotation, multiple alignments, syntenic mappings, short read alignments and more. Many standard...

Gendraw was specially developed to aid you in drawing genome graphs. It has multiple graphic elements to represent different types of contents. The contents for drawing can be imported from a standard Genbank or EMBL flatfile, or manually given by the user.

The BLAST Ring Image Generator (BRIG) is a cross-platform JAVA application, it has a graphical user interface, which takes the user step-by-step through the configuration of a genome circular visualization.


Platforms: Mac

SVDetect is a application for the isolation and the type prediction of intra- and inter-chromosomal rearrangements from paired-end/mate-pair sequencing data provided by the high-throughput sequencing technologies This tool aims to identifying structural variations with both clustering and...


Platforms: *nix

The Integrated Genome Browser (IGB, pronounced Ig-Bee) is an interactive, zoomable, scrollable software program you can use to visualize and explore genome-scale data sets, such as tiling array data, next-generation sequencing results, genome annotations, microarray designs, and the sequence...


Platforms: Windows

XMMS Root Visualization Plugin is a little XMMS plugin wich can draw a spectrum analyzer directly to the background (root window) of X. Whats New in This Release: - changed code to get rid of gcc 4 compiler warnings - added alpha channel to all colors - rewrote configuration backend -...


Platforms: *nix

The Celera Genome Browser, developed at Celera Genomics as part of Celera's sequencing and annotation of the human genome, and released as open source in 2006.


Platforms: Linux

iMethy is a handy, easy to use genome-wide DNA methylation analysis and visualization application based on next generation sequencing. Firstly, it holds the command-line pipeline to align the bisulfite-treated short read, identify the methylcytosine at CG/CHG/CHH sites, detect the methylation...


Platforms: Windows

Visualization in Geometric Knot Theory is a small, Java based application specially designed to help you create different interactive visualizations in geometric knot theory. Most of the software's options are available via the context menu of corresponding components and their toolbars and...


Platforms: Windows

The Celera Genome Browser, developed at Celera Genomics as part of Celera's sequencing and annotation of the human genome, and released as open source in 2006.


Platforms: Linux

The Visualization Toolkit (VTK) is an open-source, freely available software system for 3D computer graphics, image processing and visualization. VTK consists of a C++ class library and several interpreted interface layers including Tcl/Tk, Java, and Python. Kitware, whose team created and...


Platforms: Windows, Mac, Linux

Power Engineering Visualization VC++ Source Code Solutions UCanCode Softwareis a world-class Power Engineering Solutions provider with an established reputation for customer responsiveness and technical expertise. Our solutions stand behind thousands of T&D projects in over 40 countries around...


Platforms: Windows

PMN Solution Visualization .NET/VC++ Source Code Kit -- Build Advanced Diagrams and Dashboards for Business Process Management (BPM) in minutes Business Process Modeling (BPM) is typically performed by business analysts who are seeking to improve process efficiency. Process oriented...


Platforms: Windows

The code in this submission describes how to download and install the Visualization Toolkit (VTK, www.vtk.org) and create a MATLAB mex file to interface with it.An example C++ mex file and code to build and run the mex file are included.


Platforms: Matlab

This is the data set you will need to participate in the Data Visualization contest. For more information, refer to the rules posted here. http://www.mathworks.com/contest/datavis/rules.htmlYou can also follow the latest announcements on the contest blog here. http://blogs.mathworks.com/contest/


Platforms: Matlab

Open Visualization Data Explorer is a visualization framework that gives users the ability to apply advanced visualization and analysis techniques to their data. These techniques can be applied to help users gain new insights into data from applications in a wide variety of fields including...


Platforms: All

Gitools, is a framework for analysis and visualization of genomic data. Data and results are represented as browsable heatmaps. Gitools allows to import data directly from IntOGen and Biomart.


Platforms: Windows

Data Visualization is a free generic cross platform tool that allows the user to create documents in an easy way. You can easily create layout of the document and import data from almost any data base (Oracle, MySQL, PostgreSQL, Firebird, MS SQL Server, IBM DB2, Interbase, SQLite) or from...


Platforms: Windows, Mac, Java, Linux, Linux Gnome, Linux GPL, Linux Open Source, MS-DOS, Unix, Other

3D Genome Tuner draws circular genome map and enables viewing multi-genomes in 3D context. It also provides genome analysis and sequence alignment, making it a powerful tool in genome studies and demonstrations.


Platforms: Windows, Mac, Linux

The Business Continuity Visualization Toolkit assists in the assessment of Business Continuity projects and helps to translate dry technical relationships into colorful pictures suitable for management presentations and board decisions.


Platforms: Windows, Mac, Linux