Molecular Vibrations
EMBOSS is "The European Molecular Biology Open Software Suite", it is a free Open Source software analysis package specially developed for the needs of the molecular biology user community. The software automatically copes with data in a variety of formats and even allows transparent retrieval of...
Platforms: Most OSs
License: Freeware | Size: 17.6 MB | Download (1202): EMBOSS Download |
GROMACS is a versatile package to perform molecular dynamics, i.e. simulate the Newtonian equations of motion for systems with hundreds to millions of particles.
It is primarily designed for biochemical molecules like proteins, lipids and nucleic acids that have a lot of complicated bonded...
Platforms: Mac, Linux
License: Freeware | Size: 9.92 MB | Download (675): Gromacs for Mac OS X and Linux Download |
CHEMIX School is an educational tool for learning chemistry. It is geared toward college-level chemistry, but is also appropriate for high-school students, chemists, and teachers. It is equipped with a periodic table containing physical properties for all stable isotopes including more than 2500...
Platforms: Windows
License: Shareware | Cost: $39.00 USD | Size: 1.29 MB | Download (673): CHEMIX School - Chemistry Software Download |
This is a very useful calculator for science students. The system contains a scientific calculator that can calculate molecular mass, and from this main calculator over 80 other calculators and science tools can be called.
These include an extensive measurement converter, an area and volume...
Platforms: Windows
License: Freeware | Size: 1.22 MB | Download (668): Science Calculator Download |
Molecular Weight Calculator is an easy to use program to calculate the mass of a molecular formula and composition of each atom. Allows entry of chemical formulas in commonly-used syntax both empirical and molecuar formula.This innovative program provides a fast and easy-to-use tool. This is an...
Platforms: Pocket PC 2002
License: Commercial | Cost: $5.00 USD | Size: 453 KB | Download (646): Molecular Weight Calculator for Pocket PC Download |
PaDEL-Descriptor is a handy utility designed to perform molecular calculation. It calculates 797 descriptors (663 1D, 2D descriptors and 134 3D descriptors) and 10 types of fingerprints.
Platforms: Windows
License: Freeware | Download (510): PaDEL-Descriptor Download |
This is an educational program for the field of physics and chemistry, supported by simulations. This program is a type of graphic simulation, which is the mostimportant element for educational purposes. The program consists of nine sequences (substance classification, molecule motion, Diffusion,...
Platforms: Windows
License: Shareware | Cost: $9.25 USD | Size: 563.2 KB | Download (505): Molecular Structure of the Substance Download |
Geneious is a useful, unique and easy-to-use software system which has been designed to greatly speed up and simplify the research in molecular biology and biochemistry.
Geneious is a cross-platform research engine for the retrieval, organization and analysis of biomolecular data that allows...
Platforms: Windows
License: Freeware | Size: 39.6 MB | Download (504): Geneious Basic x64 Download |
Molecular-based diagnostic assays are the gold standard for infectious diseases today, since they allow a rapid and sensitive identification and typing of various pathogens.
While PCR can be designed to be specific for a certain pathogen, a subsequent sequence analysis is frequently required...
Platforms: Windows
License: Freeware | Download (496): mPSQed Download |
Open3DQSAR is an open-source tool aimed at pharmacophore exploration by high-throughput chemometric analysis of molecular interaction fields (MIFs). Open3DQSAR can generate steric potential, electron density and MM/QM electrostatic potential fields; furthermore, it can import GRIDKONT binary...
Platforms: Windows
License: Freeware | Size: 1.01 MB | Download (487): Open3DQSAR Download |
MOPlot is a handy visualization application specially designed for fast molecular orbitals plotting from the outputs of the Gaussian 03/98/94, Molcas, Gamess/US quantum chemical calculation packages. This Molecular Orbital Plotting Program will prove to be easy-to-use and very efficient.
MOPlot...
Platforms: Windows, XP
License: Freeware | Download (478): MOPlot Download |
Geneious is a useful, unique and easy-to-use software system which has been designed to greatly speed up and simplify the research in molecular biology and biochemistry.
Geneious is a cross-platform research engine for the retrieval, organization and analysis of biomolecular data that allows...
Platforms: Windows
License: Freeware | Size: 39.6 MB | Download (468): Geneious Basic Download |
Open3DGRID is an application designed for high-throughput generation of molecular interaction fields or MIFs. Open3DGRID can generate steric potential, electron density and MM / QM electrostatic potential fields; furthermore, it can import GRIDKONT binary files produced by GRID and CoMFA / CoMSIA...
Platforms: Windows
License: Freeware | Download (465): Open3DGRID x64 Download |
Open3DQSAR is an open-source tool aimed at pharmacophore exploration by high-throughput chemometric analysis of molecular interaction fields (MIFs). Open3DQSAR can generate steric potential, electron density and MM/QM electrostatic potential fields; furthermore, it can import GRIDKONT binary...
Platforms: Linux
License: Freeware | Size: 1.4 MB | Download (460): Open3DQSAR for Linux Download |
BALLView is our standalone molecular modeling and visualization application. Furthermore it is also a framework for developing molecular visualization functionality. It is available free of charge under the GPL for Linux, Windows and MacOS.
It provides fast OpenGL-based visualization of...
Platforms: Windows
License: Freeware | Size: 38 MB | Download (457): BALLView Download |
SketchEl is an interactive chemical molecule sketching tool, and molecular spreadsheet data entry application. The feature set provided by the molecular sketcher is largely limited to the minimum features required to conveniently edit diagram representations of small molecule structures....
Platforms: Windows
License: Freeware | Download (454): SketchEl Download |
PyMOL is a user-sponsored molecular visualization system on an open-source foundation. Please support development of this open, effective, and affordable software by purchasing an incentive copy, which is pre-built and comes with maintenance and support.
PyMOL can interpret over 30 different...
Platforms: Windows, Mac, Linux
License: Freeware | Size: 9.1 MB | Download (443): PyMOL Download |
The Ascalaph Designer application was developed for molecular models and simulations. Using this application you can simulate, molecular graphics, optimization, molecular dynamics, quantum chemistry.
Features:
Molecular graphics
Multiple windows
Two cameras per model
CPK, Wire frame,...
Platforms: Windows
License: Freeware | Size: 72 MB | Download (442): Ascalaph Designer Download |
Open3DQSAR is an open-source tool aimed at pharmacophore exploration by high-throughput chemometric analysis of molecular interaction fields (MIFs). Open3DQSAR can generate steric potential, electron density and MM/QM electrostatic potential fields; furthermore, it can import GRIDKONT binary...
Platforms: Mac
License: Freeware | Size: 1.1 MB | Download (436): Open3DQSAR for Mac OS X Download |
Ascalaph Graphics is a handy, easy-to-use program designed to provide a graphical interface of the system. The program includes the window interface and three-dimensional graphics of molecular models.
Ascalaph Graphics shows molecular models in separate windows. Each window has two cameras,...
Platforms: Windows
License: Freeware | Size: 16.2 MB | Download (436): Ascalaph Graphics Download |