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Using the CUDA API this project modifies the AutoDock software to run in parallel on NVIDIA GPUs. Users will be able to download and compile the code and use AutoDock on CUDA capable Graphics Cards. Autodock is located at http://autodock.scripps.edu/ Platforms: Mac, BSD, Linux

Bayesian Surprise Matlab toolkit is a basic toolkit for computing Bayesian surprise values given a large set of input samples. It is also useful as way of exploring surprise theory. For more information see also: http://ilab.usc.edu/ Platforms: Windows, Mac, Linux

A web-based repository of plasmids and biobricks (see http://parts.mit.edu) plus related utility programs that support synthetic biology research. Platforms: Windows, Mac, Linux

Cheshire3 is a fast Z39.50, SRW, XML search engine, written in Python for extensability and using C libraries for speed. Next generation of the Cheshire system (http://cheshire.berkeley.edu) and designed around a distributable, object oriented model. Platforms: Windows, Mac, BSD, Solaris, Linux

A subset of the TestCon project, ConAn builds on Roast to provide a testing framework for concurrent Java components. For more details on the TestCon project see http://www.itee.uq.edu.au/~testcon/ Platforms: Windows, Mac, Linux

A newLISP - www.newlisp.org - macro which allows the user to 'define' callable foreign code inline just as they would 'define' a lambda or macro. C, Assembly and plain Object Code plugins are included. The Object Code plugin has no external dependencies. The C and Assembly plugins rely on the... Platforms: Windows, Mac, Linux

Echoproc is a piece of scientific analysis software used to extract physical ice sheet characteristics from radio echograms from experiments like the Center for the Remote sensing of ice sheets (https://www.cresis.ku.edu/) Platforms: Windows, Mac, Linux

Fnorb is a CORBA 2.0 ORB for Python first developed by DSTC (http://www.dstc.edu.au). Our project will take the formerly closed Fnorb source-base and turn it into a pure-python ORB with up-to-date Python mapping and CORBA 2.4 compliance (ie POA support). Platforms: Windows, Mac, Linux

froi (FS-FAST ROI) is a suite of Perl scripts and modules to provide easy slice-, volume-, and surface-based ROI analysis of functional MRI (fMRI) data analyzed by FS-FAST and Freesurfer (http://surfer.nmr.mgh.harvard.edu). Platforms: Mac, BSD, Solaris, Linux

GGPrayer is an AI capable of playing any game described in the GameDescriptionLanguage defined in http://games.stanford.edu/.It uses Java to communicate to the gameserver and Prolog for reasoning. Info: http://bruno-wp.blogspot.com/search/label/Software Platforms: Windows, Mac, Linux

The intention of this project is to support users of Randall Hyde's HLA (High Level Assembly) language who wish to maintain, extend, or evolve the HLA Standard Library. http://webster.cs.ucr.edu/AsmTools/HLA/index.html Platforms: Windows, Mac, BSD, Linux

http://www.princeton.edu:80/pr/pwb/01/0326/1b.shtmlhttp://www.cs.princeton.edu/immsim/Immsim is an immune system simulation used by Immunology students and researchers. Currently it is being used at Princeton University. Platforms: Windows, Mac, Linux

The virtual lab is a NASA-funded project to provide simulated instrumentation. ITG has developed a Virtual Microscope (Virtual SEM and LM) for viewing high-resolution, multi-dimensional image datasets. More info and data: http://virtual.itg.uiuc.edu Platforms: Windows, Mac, Linux

JTreeMap is a Swing Component which represents a tree structure with rectangles (a TreeMap. See http://www.cs.umd.edu/hcil/treemap/). KTreeMap is the SWT component for treemapping (see http://en.wikipedia.org/wiki/Treemapping). It is an Eclipse plugin. Platforms: Windows, Mac, Linux

Kaboum is an advanced java 1.1 applet that offers a user friendly interface to the mapserver cgi program (http://mapserver.gis.umn.edu).The displayed maps are made from a combination of mapserver output (gif or jpg image) with editable vectors layers. Platforms: Windows, Mac, Linux

MicroArray Genome Imaging and Clustering Tool (MAGIC tool) is a platform-independant java program for analyzing MicroArray data (.tiff scans & .txt godlists) via graphs and clustering operations (including QT-clustering). http://www.bio.davidson.edu/magic Platforms: Windows, Mac, Linux

The Maude Development Tools are a set of plugins that embed the maude interpreter (http://maude.cs.uiuc.edu) in Eclipse. It provides a core plugin, which allows to any Java program to use Maude, and a set of plugins which provide an Eclipse-based IDE Platforms: Windows, Mac, Linux

Mailcrypt is an Emacs interface to PGP and GnuPG which allows seamless integration of cryptography and internet usage. It can be used to sign and encrypt mail, to sign usenet articles, and to verify/decrypt mail and articles. It was written by Jin Choi jin@atype.com and Pat LoPresti... Platforms: *nix

mobcalPARSER is a PERL (http://www.perl.org/) frontend/interface for MOBCAL. 'MOBCAL - A Program to Calculate Mobilities' itself is available from Professor Martin F. Jarrold's webpage http://www.indiana.edu/~nano/software.html. Platforms: Windows, Mac, Linux

OVATION Prime is a seasonal model of the diffuse, monoenergetic, proton, and wave aurora. The OVATION Prime model is written in IDL and was developed at the Johns Hopkins Applied Physics Laboratory (JHU-APL) by Patrick Newell and co-workers. This current version includes updates to the... Platforms: Windows, Mac, Linux