Speak English Or Die

MassSpec::ViewSpectrum::RealVsHypPeptide is a Perl module to view a real mass spectrum on the same graph as a hypothetical spectrum generated by fragmenting a peptide in silico. SYNOPSIS use MassSpec::ViewSpectrum::RealVsHypPeptide; open GRAPHIC, ">mygraphic.png" or die "Unable to open...

MP4::Info is a Perl module that can fetch info from MPEG-4 files (.mp4, .m4a, .m4p, .3gp). SYNOPSIS #!perl -w use MP4::Info; my $file = Pearls_Before_Swine.m4a; my $tag = get_mp4tag($file) or die "No TAG info"; printf "$file is a %s trackn", $tag->{GENRE}; my $info =...

[COPRIGHT=1] EXAMPLES General #!/usr/bin/perl -w use strict; use DBIx::Simple; # Instant database with DBD::SQLite my $db = DBIx::Simple->connect(dbi:SQLite:dbname=file.dat) or die DBIx::Simple->error; # Connecting to a MySQL database my $db = DBIx::Simple->connect(...


Platforms: *nix

SNMP::Multi is a Perl module to perform SNMP operations on multiple hosts simultaneously. SYNOPSIS use SNMP::Multi; my $req = SNMP::Multi::VarReq->new ( nonrepeaters => 1, hosts => [ qw/ router1.my.com router2.my.com / ], vars => [ [ sysUpTime ], [ ifInOctets ], [ ifOutOctets ] ], );...


Platforms: *nix

Hash::Type module contains pseudo-hashes as arrays tied to a "type" (list of fields). SYNOPSIS use Hash::Type; # create a Hash::Type my $personType = new Hash::Type(qw(firstname lastname city)); # create and populate some hashes tied to $personType tie %wolfgang, $personType, "wolfgang...


Platforms: *nix

Bio::Graphics::Panel is a Perl module to generate GD images of Bio::Seq objects. SYNOPSIS # This script parses a GenBank or EMBL file named on the command # line and produces a PNG rendering of it. Call it like this: # render.pl my_file.embl | display - use strict; use Bio::Graphics;...


Platforms: *nix

The Pawn Project aims to make computing easy for anyone with an easy-to-use desktop environment. How often have you felt that your computer could be smarter ? Arent you tired of the old drag and drop style desktop and the horribly command promps. Well Open Pawn Projekt (OPP) is about to...


Platforms: *nix

GD::Graph::colour contains colour manipulation routines for use with GD::Graph. SYNOPSIS use GD::Graph::colour qw(:colours :lists :files :convert); The GD::Graph::colour package provides a few routines to work with colours. The functionality of this package is mainly defined by what is...


Platforms: *nix

GD::Graph is a graph plotting module for Perl 5. SYNOPSIS use GD::Graph::moduleName; GD::Graph is a perl5 module to create charts using the GD module. The following classes for graphs with axes are defined: GD::Graph::lines Create a line chart. GD::Graph::bars and GD::Graph::hbars...


Platforms: *nix

GD::Text is a Perl module with text utilities for use with GD. SYNOPSIS use GD; use GD::Text; my $gd_text = GD::Text->new() or die GD::Text::error(); $gd_text->set_font(funny.ttf, 12) or die $gd_text->error; $gd_text->set_font(gdTinyFont); $gd_text->set_font(GD::Font::Tiny); ......


Platforms: *nix

Audio:PSID is a Perl module to handle SID files (Commodore-64 music files). SYNOPSIS use Audio::SID; $mySID = new Audio::SID(-filename => Test.sid) or die "Whoops!"; print "Title = " . $mySID->get(title) . "n"; print "MD5 = " . $mySID->getMD5(); $mySID->set(author => LaLa, title =>...


Platforms: *nix

Net::Telnet::Netscreen is a Perl module that interacts with a Netscreen firewall. Net::Telnet::Netscreen is mostly a pure rippoff of Net::Telnet::Cisco, with adaptations to make it work on the Netscreen firewalls. It also has some additional commands, but for basic functionality, see...


Platforms: *nix

Tie::File can access the lines of a disk file via a Perl array. SYNOPSIS # This file documents Tie::File version 0.96 use Tie::File; tie @array, Tie::File, filename or die ...; $array[13] = blah; # line 13 of the file is now blah print $array[42]; # display line 42 of the file $n_recs...


Platforms: *nix

Net::Server::POP3proxy is a Perl module with POP3 Proxy class for working with virus scanners and anti-spam software. SYNOPSIS use Net::Server::POP3proxy; # Constructors $popproxy = new Net::Server::POP3proxy( Action => sub { filterAction ($_[0]); }, Error => sub { die ($_[0]); }, Debug...


Platforms: *nix

CGI::XMLForm is a Perl extension of CGI.pm which reads/generates formated XML. NB: This is a subclass of CGI.pm, so can be used in its place. SYNOPSIS use CGI::XMLForm; my $cgi = new CGI::XMLForm; if ($cgi->param) { print $cgi->header, $cgi->pre($cgi->escapeHTML($cgi->toXML)); } else {...


Platforms: *nix

SNMP::Info::Layer2::C2900 is a SNMP Interface to Cisco Catalyst 2900 Switches running IOS. SYNOPSIS # Let SNMP::Info determine the correct subclass for you. my $c2900 = new SNMP::Info( AutoSpecify => 1, Debug => 1, # These arguments are passed directly on to SNMP::Session DestHost =>...


Platforms: *nix

SNMP::Info::Layer3::Aironet is a Perl5 Interface to Cisco Aironet Wireless Devices running Aironet software, not IOS. SYNOPSIS # Let SNMP::Info determine the correct subclass for you. my $aironet = new SNMP::Info( AutoSpecify => 1, Debug => 1, # These arguments are passed directly on to...


Platforms: *nix

POE::Component::Client::FTP is a Perl module that implements an FTP client POE Component. SYNOPSIS use POE::Component::Client::FTP; POE::Component::Client::FTP->spawn ( Alias => ftp, Username => test, Password => test, RemoteAddr => localhost, Events => [ qw( authenticated put_connected...


Platforms: *nix

Mail::Sendmail is a simple platform independent mailer. SYNOPSIS use Mail::Sendmail; %mail = ( To => you@there.com, From => me@here.com, Message => "This is a very short message" ); sendmail(%mail) or die $Mail::Sendmail::error; print "OK. Log says:n", $Mail::Sendmail::log; Simple...


Platforms: *nix

Net::Z3950 is a Perl extension for talking to Z39.50 servers. WARNING You should not be using this module unless you need this precise API for compatibility reasons. New applications should use the ZOOM-Perl module (Net::Z3950::ZOOM) instead. SYNOPSIS (This code blocks in reads: see below...


Platforms: *nix