Sequence Tester

Mallard is a handy, Java based application based on the Pintail algorithm designed to work by comparing evolutionary distances between a query and subject sequence over the length of the 16S rRNA gene (small subunit rRNA), by employing a sampling window of specified size, progressing a fixed... Platforms: Windows

QuickPHP is a PHP Tester and Debugger which is also an extremely lightweight PHP Web Server. It is a PHP Development Web Server - similar to ASP.NET Development Web Server. Features: Handles GET, POST and HEAD requests; Does not rely on PHP to be installed; Supports PHP extensions and PHP.ini... Platforms: Windows

In this game you will be presented with a sequence of random objects and you need to memorise them and then repeat the sequence. The number of objects will increase as the level increases. If you picked up the wrong object, then the game is over. Platforms: Windows

BSmapper - Sequence mapper for bisulfite sequencing reads for DNA methylation studies. Can handle Sanger and 454 reads for mapping to whole genomes or target regions. Platforms: Mac

RNNLIB is a recurrent neural network library for sequence learning problems. Applicable to most types of spatiotemporal data, it has proven particularly effective for speech and handwriting recognition. Platforms: Mac

A fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis tools (Spin) for Unix, Linux, MacOSX and MS Windows. Platforms: Mac

BlastViewer provides an interactive graphical user interface for the analysis of the reports produced by the BLAST sequence database search system. BlastViewer is an easy to use software designed for everyday biological sequence analysis relying on BLAST. It allows an easy visualisation and... Platforms: Mac, Java 1.5 or later

This module introduces an alternative syntax a-la shell pipes for sequence-oriented functions, such as filter, map, etc., via certain classes that override __ror__ method. Platforms: Windows, Mac, *nix, Python, BSD Solaris

This contribution uses the SORBS database(s) to detect open proxy servers. Customers surfing the site through a known open proxy receive an error page if they try to add anything to their cart.In the event that they somehow manage to get something into their cart, the open proxy test is repeated... Platforms: Windows, *nix, PHP, BSD

This script allows you to sort recursively nested lists if iterable is a mutable sequence type. Platforms: Windows, Mac, *nix, Python, BSD Solaris

This script defines permIter() function that takes a sequence and returns an iterator that goes through all possible permutations of that sequence. Platforms: Windows, Mac, *nix, Python, BSD Solaris

This script allows you to quickly select the n-th rank ordered element of a given sequence. It modifies the ordering of the given sequence. Platforms: Windows, Mac, *nix, Python, BSD Solaris

This script computes an infinite sequence of primes using simple generators. A Python dictionary is used to mark multiples of the generated primes, according to the Sieve of Eratosthenes. Platforms: Windows, Mac, *nix, Python, BSD Solaris

This script is useful when you want to get the items from a sequence (or other iterable) a batch at a time, including a short batch at the end if need be. Platforms: Windows, Mac, *nix, Python, BSD Solaris

lvbox displays a sequence of images and text applying transition effects between them. Any slide can be an image or a text, and can have an associated link.Text and image names can be set by using parameters or by writing a text file like this.Using a text file allows to edit the contents very... Platforms: Java

These programmes are not heavily commented but infact are very simple and intutive to understand the Frequency hopping and related tasks.I have made two files for frequency hopping, one of them is not showing 6 proper impulsive peaks but other programme is infact showing them, In DSSS i have... Platforms: Matlab

This m-file generates all the m-sequences of length 31.To generate the m-sequence of length 31 we use Primitive polynomial of degree 5.There are three primitive polynomial of degree 5, so there will be 3 different m-sequences of length 31. Platforms: Matlab

This is an FSK modulation spread with a PN sequence generator.It is a simulation file that illustrates the effects of spread spectrum communications.I am interested on collaboration. Platforms: Matlab

This function estiamtes the Kolmogorov Complexity of a binary sequence. The algorithm is as described in Lempel and Ziv (IEEE trans inf theory IT-22, 75 (1976)) and Kaspar and Schuster (Physical Review A, vol 36, no 2, pg 842).Input is binary sequence, output is kolmogorov complexity. Platforms: Matlab

This program deals with Spread spectrum communication systems using chaos as the sequence generators.In coming days I will be updating it with complete chaos based generators Frequency Hopping and CDMA systems with multiple users and till oustic networks poustic networks phase. Platforms: Matlab