Sequence Iterator

This script defines permIter() function that takes a sequence and returns an iterator that goes through all possible permutations of that sequence. Platforms: Windows, Mac, *nix, Python, BSD Solaris

Iterator::Util Perl package contains essential utilities for the Iterator class. SYNOPSIS use Iterator::Util; # Transform sequences $iterator = imap { transformation code } $some_other_iterator; # Filter sequences $iterator = igrep { condition code } $some_other_iterator; # Range of... Platforms: *nix

Iterator::Misc Perl module package contains miscellaneous iterator functions. SYNOPSIS use Iterator::Misc; # Permute the elements of a list: $iter = ipermute (@items); # Select only every nth value of an iterator $iter = inth ($n, $another_iterator); # Randomly select iterator values... Platforms: *nix

Iterator is a general-purpose iterator class. SYNOPSIS use Iterator; # Making your own iterators from scratch: $iterator = Iterator->new ( sub { code } ); # Accessing an iterators values in turn: $next_value = $iterator->value(); # Is the iterator out of values? $boolean =... Platforms: *nix

Iterator::IO is a Perl module with filesystem and stream iterators. SYNOPSIS use Iterator::IO; # Return the names of files in a directory (except . and ..) $iter = idir_listing ($path); # Return all the files in a directory tree, one at a time. # Like File::Find, in slow motion. $iter... Platforms: *nix

This script includes a collection of small utility functions for iterators (all functions can also be used with normal sequences). Among other things, the module provides generator ("lazy") versions of the built-in sequence-manipulation functions. The generators can be combined to produce a more... Platforms: Windows, Mac, *nix, Python, BSD Solaris

Net::Delicious::Iterator is an iterator class for Net::Delicious thingies. SYNOPSIS use Net::Delicious::Iterator; my @dates = ({...},{...}); my $it = Net::Delicious::Iterator->new("Date",@dates); while (my $d = $it->next()) { # Do stuff with $d here } NOTES It isnt really expected... Platforms: *nix

SPOPS::Iterator is a class to cycle through results and return SPOPS objects. SYNOPSIS my $iter = $spops_class->fetch_iterator({ where => last_name like ?, value => [ smi% ] }); while ( $iter->has_next ) { my $object = $iter->get_next; print "Object ID: ", $object->id, " at position: ",... Platforms: *nix

UML::Sequence is a Perl module to render UML sequence diagrams, often by running the code. SYNOPSIS use UML::Sequence; my $tree = UML::Sequence->new(@methods, @outline, &parse_method); print $tree->build_xml_sequence(Title); To use this package, or see how to use it, see genericseq.pl... Platforms: *nix

UML::Sequence::JavaSeq is a Perl module for use with genericseq.pl script, works on compiled Java programs. SYNOPSIS genericseq.pl UML::Sequence::JavaSeq Hello.methods Hello > Hello.xml seq2svg.pl Hello.xml > Hello.svg OR genericseq.pl UML::Sequence::JavaSeq Hello.methods Hello |... Platforms: *nix

Chart::Sequence is a sequence Perl class. SYNOPSIS use Chart::Sequence; my $s = Chart::Sequence->new( Nodes => [qw( A B C )], Messages => [ [ A => B => "Message 1" ], [ B => A => "Ack 1" ], [ B => C => "Message 2" ], ], ); # or # my $s = Chart::Sequence->new( SeqMLInput =>... Platforms: *nix

Array::Iterator is a simple class for iterating over Perl arrays. SYNOPSIS use Array::Iterator; # create an iterator with an array my $i = Array::Iterator->new(1 .. 100); # create an iterator with an array reference my $i = Array::Iterator->new(@array); # create an iterator with a... Platforms: *nix

Iterator::BreakOn is a Perl module to create iterators with control flow breaks. SYNOPSIS use Iterator::BreakOn; # # get a generic data source with a next method implemented whom # returns a generic object # # in this example the order of the items in the data stream is assumed # to... Platforms: *nix

Sequence Analysis project is a collage of coding projects which I have written over the past several years for various clients in my work as a bioinformatics consultant. These clients have graciously allowed me to release these works into the public domain as freeware for Macintosh OS X in... Platforms: *nix

Short Sequence Location Mapper loads the sequences, then aligns them and finally graphs and tables can be generated for one or more datasets at the same time. SSLM typically works with a BLAST data output file of short Solexa reads mapped to RNA subjects (for example pre-miRNA sequences). The... Platforms: Windows

Creates an Excel spreadsheet report about the video clips, audio clips and markers you've used in your edited sequence. The report includes sheets for: Clips, Sequence Markers, Clip Markers, Clip Filters, and Reels. Sequence Clip Reporter takes the tedious work out of creating clip usage reports... Platforms: Mac

This script is an iterator that can be used to walk through directories.This class is intended to provide an iterator version of the os.listdir function. The interesting property of the iterator is that you can control if you want a deep iteration of directories with the 'deep' member.After... Platforms: Windows, Mac, *nix, Python, BSD Solaris

This script presents a general purpose file object iterator cum file object proxy class.It provides a class that gives several iterator functions to read a text file by characters, words, lines, paragraphs or blocks. It also acts as a proxy for the wrapped file object. ts as a pOne way to do it... Platforms: Windows, Mac, *nix, Python, BSD Solaris

The fastest way to remove duplicates from a sequence depends on some pretty subtle properties of the sequence elements, such as whether they're hashable, and whether they support full comparisons. This script defines the unique() function that tries three methods, from fastest to slowest,... Platforms: Windows, Mac, *nix, Python, BSD Solaris

This script contains a function that given a sequence and a number n as parameters, returns the th permutation of the sequence (always as a list). Platforms: Windows, Mac, *nix, Python, BSD Solaris