Molecular Mass
MassSpec::ViewSpectrum::RealVsHypPeptide is a Perl module to view a real mass spectrum on the same graph as a hypothetical spectrum generated by fragmenting a peptide in silico. SYNOPSIS use MassSpec::ViewSpectrum::RealVsHypPeptide; open GRAPHIC, ">mygraphic.png" or die "Unable to open...
Platforms: *nix
License: Freeware | Size: 8.19 KB | Download (93): MassSpec::ViewSpectrum::RealVsHypPeptide Download |
nautilus-image-converter project is a Nautilus extension to mass resize images. Adds a "Resize Images..." menu item to the context menu of all images. This opens a dialog where you set the desired image size and file name. A click on "Resize" finally resizes the image(s) using ImageMagicks...
Platforms: *nix
License: Freeware | Size: 245.76 KB | Download (147): nautilus-image-converter Download |
Chain Reaction (aka Critical Mass, aka Atoms) is an addictive, multi-player board game. Lee Haywoods Chain Reaction is easy to learn to play. There is a computer player (for 2 player games only). - Players take turns to add units (blobs) of their colour to either an empty cell or a cell they...
Platforms: *nix
License: Freeware | Size: 460.8 KB | Download (93): Lee Haywoods Chain Reaction Download |
Audiotag is a command-line tool for mass tagging/renaming of audio files. The application was written because i really dont like any of the id3/ogg tag managers found on freshmeat, most are inadequate, only support one format, or have a poorly designed/unnecessary GUI. Originally, i wrote this...
Platforms: *nix
License: Freeware | Size: 14.34 KB | Download (98): Audiotag Download |
Bio::MCPrimers is a Perl module to create molecular cloning PCR primer pairs for a given gene so that the gene can be directionally inserted into a vector. Solver is generic, restriction enzymes and their order in the vector are specified in the caller. XPORT SUBROUTINES sub find_mc_primers...
Platforms: *nix
License: Freeware | Size: 174.08 KB | Download (109): Bio::MCPrimers Download |
LAMMPS project is a Molecular Dynamics Simulator. LAMMPS has potentials for soft materials (biomolecules, polymers) and solid-state materials (metals, semiconductors) and coarse-grain systems. It can be used to model atoms or, more generically, as a parallel particle simulator at the mesoscale...
Platforms: *nix
License: Freeware | Download (129): LAMMPS Download |
Tellmatic project is a tool to manage and create newsletters for personalized mailing or mass mailing. Addresses and newsletters are stored in groups to handle different user groups and thousands of addressses at a time. SMTP is used for sending the newsletter to your subscribers to make sure...
Platforms: *nix
License: Freeware | Size: 1.7 MB | Download (116): Tellmatic Download |
[ via XLR8YourMac ] USB Mass Storage Support is a set of USB Mass Storage Class drivers to support USB Mass Storage Class devices. USB includes the notion of Class drivers, a set of software components generally delivered by Operating System vendors that are able to communicate with not just one,...
Platforms: Mac
License: Freeware | Size: 139 KB | Download (813): Mass Storage Class Drivers Download |
Open3DALIGN is an open-source software aimed at unsupervised molecular alignment. Open3DALIGN is a command-line tool which is operated by means of a few commands which can be entered interactively from a command prompt, read from a batch script or piped through standard input. If PyMOL is...
Platforms: Windows
License: Freeware | Size: 5.2 MB | Download (420): Open3DALIGN x64 Download |
BALLView is our standalone molecular modeling and visualization application. Furthermore it is also a framework for developing molecular visualization functionality. It is available free of charge under the GPL for Linux, Windows and MacOS.
It provides fast OpenGL-based visualization of...
Platforms: Windows
License: Freeware | Size: 38 MB | Download (461): BALLView Download |
PyMOL is a user-sponsored molecular visualization system on an open-source foundation. Please support development of this open, effective, and affordable software by purchasing an incentive copy, which is pre-built and comes with maintenance and support.
PyMOL can interpret over 30 different...
Platforms: Windows, Mac, Linux
License: Freeware | Size: 9.1 MB | Download (443): PyMOL Download |
The Ascalaph Designer application was developed for molecular models and simulations. Using this application you can simulate, molecular graphics, optimization, molecular dynamics, quantum chemistry.
Features:
Molecular graphics
Multiple windows
Two cameras per model
CPK, Wire frame,...
Platforms: Windows
License: Freeware | Size: 72 MB | Download (442): Ascalaph Designer Download |
Geneious is a useful, unique and easy-to-use software system which has been designed to greatly speed up and simplify the research in molecular biology and biochemistry.
Geneious is a cross-platform research engine for the retrieval, organization and analysis of biomolecular data that allows...
Platforms: Windows
License: Freeware | Size: 39.6 MB | Download (468): Geneious Basic Download |
MOPlot is a handy visualization application specially designed for fast molecular orbitals plotting from the outputs of the Gaussian 03/98/94, Molcas, Gamess/US quantum chemical calculation packages. This Molecular Orbital Plotting Program will prove to be easy-to-use and very efficient.
MOPlot...
Platforms: Windows, XP
License: Freeware | Download (478): MOPlot Download |
mMass presents open source multi-platform package of tools for precise mass spectrometric data analysis and interpretation. It is written in Python language and released under GNU General Public License, so it's portable to different computer platforms and has a good potential to be easily...
Platforms: Mac
License: Freeware | Size: 32 MB | Download (437): mMass for Mac Download |
Geneious is a useful, unique and easy-to-use software system which has been designed to greatly speed up and simplify the research in molecular biology and biochemistry.
Geneious is a cross-platform research engine for the retrieval, organization and analysis of biomolecular data that allows...
Platforms: Windows
License: Freeware | Size: 39.6 MB | Download (504): Geneious Basic x64 Download |
Open3DGRID is an application designed for high-throughput generation of molecular interaction fields or MIFs. Open3DGRID can generate steric potential, electron density and MM / QM electrostatic potential fields; furthermore, it can import GRIDKONT binary files produced by GRID and CoMFA / CoMSIA...
Platforms: Windows
License: Freeware | Download (466): Open3DGRID x64 Download |
Open3DGRID is an application designed for high-throughput generation of molecular interaction fields or MIFs. Open3DGRID can generate steric potential, electron density and MM / QM electrostatic potential fields; furthermore, it can import GRIDKONT binary files produced by GRID and CoMFA / CoMSIA...
Platforms: Linux
License: Freeware | Download (434): Open3DGRID for Linux Download |
Open3DGRID is an application designed for high-throughput generation of molecular interaction fields or MIFs. Open3DGRID can generate steric potential, electron density and MM / QM electrostatic potential fields; furthermore, it can import GRIDKONT binary files produced by GRID and CoMFA / CoMSIA...
Platforms: Mac
License: Freeware | Download (424): Open3DGRID for Mac OS X Download |
Open3DGRID is an application designed for high-throughput generation of molecular interaction fields or MIFs. Open3DGRID can generate steric potential, electron density and MM / QM electrostatic potential fields; furthermore, it can import GRIDKONT binary files produced by GRID and CoMFA / CoMSIA...
Platforms: Windows
License: Freeware | Download (421): Open3DGRID Download |