Map Remote Tools

Bio::Tools::Run::TribeMCL is a method for clustering proteins into related groups, which are termed protein families. SYNOPSIS use Bio::Tools::Run::TribeMCL; use Bio::SearchIO; # 3 methods to input the blast results # straight forward raw blast output (NCBI or WU-BLAST) my @params =... Platforms: *nix

Bio::Tools::Run::PiseApplication::fasta is a Bioperl class for sequence database search. Parameters: fasta (Excl) Fasta program query (Sequence) Query sequence File pipe: seqfile seqtype (Excl) Is it a DNA or protein sequence (-n) protein_db (Excl) Protein Database nucleotid_db... Platforms: *nix

Bio::Tools::Run::PiseApplication::align2model is a Bioperl class for align2model - create a multiple alignment of sequences to an existing model. Parameters: align2model (String) run (String) Run name db (Sequence) Sequences to align (-db) model_file (InFile) Model (-i) pipe:... Platforms: *nix

Bio::Tools::Run::PiseApplication::consensus is a Perl module. Bioperl class for: CONSENSUS Identification of consensus patterns in unaligned DNA and protein sequences (Hertz, Stormo) References: G.Z. Hertz and G.D. Stormo. Identification of consensus patterns in unaligned DNA and protein... Platforms: *nix

Bio::Tools::Run::PiseApplication::charge is a Perl module. Bio::Tools::Run::PiseApplication::charge Bioperl class for: CHARGE Protein charge plot (EMBOSS) Parameters: (see also: http://bioweb.pasteur.fr/seqanal/interfaces/charge.html for available values): charge (String) init... Platforms: *nix

GD::Map is Perl extension for creating geographic map files with GD. SYNOPSIS use GD::Map; my $m = GD::Map:new( basemap_path => "[required]", output_path => "[required]", verbose => 1, ); $m->set_basemap("northamerica"); $m->add_object(id => "route", type => "line", color =>... Platforms: *nix

Selenium Remote Control project is a test tool that allows you to write automated web application UI tests in any programming language against any HTTP website using any mainstream JavaScript-enabled browser. Selenium Remote Control provides a Selenium Server, which can automatically... Platforms: *nix

STL AVL Map is an implementation of AVL-tree-based map, multimap, set and multiset containers for g++ 4.1.1. Almost everything on this library is based on libstdc++ v3 code, so the same license applies. The AVL operations (in lib/tree.cpp) were written by Daniel Köhler Osmari, and are under... Platforms: *nix

Xmms::Remote is a Perl Interface to xmms_remote API. SYNOPSIS use Xmms::Remote (); my $remote = Xmms::Remote->new; $remote->play; This module provides a Perl interface to the xmms remote control interface. No docs yet, sorry, see test.pl and Xmms.pm for now. Platforms: *nix

ATA over Ethernet Tools are intended for use in conjunction with an ATA over Ethernet (AoE) driver for a Linux 2.6 kernel. They perform simple tasks like listing available devices, triggering device discovery, and restricting the network interfaces on which AoE is performed. Whats New in This... Platforms: *nix

The ICMP Hostname Tools for Linux include a responder daemon, a lookup tool, and a nameswitch module to handle ICMP host name functions. The NSS module caches all requests (including failures) and honors the TTL value sent by the responding host. It uses a configuration file called... Platforms: *nix

The mjpeg programs are a set of tools that can do recording of videos and playback, simple cut-and-paste editing and the MPEG compression of audio and video under Linux. Recording is supported for the Zoran based cards like the Buz (Iomega), DC10 (MIRO, Pinnacle), Matrox Marvel cards and the... Platforms: *nix

Cmos password recovery tools decrypts password stored in cmos used to access BIOS SETUP. Works with the following BIOSes: - ACER/IBM BIOS - AMI BIOS - AMI WinBIOS 2.5 - Award 4.5x/4.6x/6.0 - Compaq (1992) - Compaq (New version) - IBM (PS/2, Activa, Thinkpad) - Packard Bell - Phoenix... Platforms: *nix

Heirloom Development Tools package provides yacc, lex, m4, make, and SCCS as portable derivatives of the utilities released by Sun as part of OpenSolaris. The OpenSolaris utilities were in turn derived from the original Unix versions, and are assumed be conforming implementations of the POSIX... Platforms: *nix

DVB Remote Key Editor project was made in order to have an easy way of modifying the keymaps of DVB-T remotes which are usually hardcoded in the corresponding kernel-modules. Currently this works for the following models: Haupauge Win-TV Nova-T USB2 dvb-usb-nova-t-usb2.ko 45 Cinergy T2... Platforms: *nix

Remote Tea project delivers a fully fledged implementation of the ONC/RPC protocol for the Java 2/1.1 platforms. Complete client and server functionality is available, as is client access to the portmapper. The package contains an rpcgen-like precompiler for converting .x files into Java... Platforms: *nix

Bio::Tools::CodonTable is a bioperl codon table object. SYNOPSIS # This is a read-only class for all known codon tables. The IDs are # the ones used by nucleotide sequence databases. All common IUPAC # ambiguity codes for DNA, RNA and animo acids are recognized. # to use use... Platforms: *nix

Bio::Map::CytoMap is a Bio::MapI compliant map implementation handling cytogenic bands. SYNOPSIS use Bio::Map::CytoMap; my $map = new Bio::Map::CytoMap(-name => human1, -species => $human); foreach my $marker ( @markers ) { # get a list of markers somewhere $map->add_element($marker); }... Platforms: *nix

lopster-tools is a set of tools for use with Lopster that allows users to view statistics for download and upload transfer, incomplete and finished files, how many MB are downloaded or uploaded, and the difference between down- and upload, amongst other features.. Get KLopsterUtils at... Platforms: *nix

The net-tools package contains a collection of programs that form the base set of the NET-3 networking distribution for the Linux operating system. It contains the important tools for controlling the network subsystem of the Linux kernel including arp, hostname, ifconfig, netstat, rarp and... Platforms: *nix