Intrinsic Pathway
BioPAX - A Data Exchange Format for Biological Pathway Information
Platforms: Windows, Mac, Linux
License: Freeware | Size: 6.57 MB | Download (44): Biological Pathway Exchange Language Download |
Pathway is a semantic browser that tracks your steps through MediaWiki sites such as Wikipedia. It represents visited pages by nodes, which are interconnected to form the trail that you've made. This enables you to keep a clear overview of your wiki explorations.
Platforms: Mac
License: Freeware | Download (97): Pathway Download |
A Tool that manages Pathway Retrieval, Visualization and Analysis. Import a Gene or Protein Set from any Excel file. Find matching Pathways from KEGG. Integrate, visualze and analyze your Data in Seconds with interactive Force-directed Layout .
Platforms: Mac
License: Freeware | Size: 9.01 MB | Download (38): PaViAn Download |
Collect all the shapes by constructing a pathway to match your creates shapes with the ones inside each level. The levels will get more complicated as you progress through the game. There is also a walkthrough available that will guide you through each level for the players that got stuck, have fun!
Platforms: Windows
License: Freeware | Size: 2.89 MB | Download (633): Mad Shapes Download |
The Edinburgh Pathway Editor (EPE) is a tool and framework that allows the drawing and manipulation of Biological Networks, such as signalling or matabolic pathways. The editor supports several notations including SBGN and Cytoscape notations.
Platforms: Windows, Mac
License: Freeware | Size: 94.53 MB | Download (44): EPE Download |
The goal of this project is to make a biologic pathway simulation / emulation application. The ultimate goal is to feed different file types to the application and configure a pathway and its behaviour.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 9.6 MB | Download (45): EPPA (Emulate ProteinPathway Application Download |
SBMLforge is a tool that enables the user to convert and merge KEGG metabolic and signaling pathways (KGML format) to create a single SBML pathway model.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 27.66 MB | Download (50): SBMLforge Download |
Stochastic simulator for signaling pathways occuring in biological cells. Handles reaction-diffusion processes in 3D tetrahedral meshes.
Platforms: Mac, BSD, Linux
License: Freeware | Size: 3.66 MB | Download (46): STochastic Engine for Pathway Simulation Download |
ViennaData is a C++ library that allows to separate intrinsic properties of a class from data associated to objects of that class. This allows to write code that is much more reusable than traditional designs.
Platforms: Windows, Mac, BSD, Linux
License: Freeware | Size: 517.54 KB | Download (45): ViennaData Download |
The Empirical Mode Decomposition is a technique to decompose a given signal into a set of elemental signals called Intrinsic Mode Functions. The Empirical Mode Decomposition is the base of the so-called d-deDUHilbert-Huang Transformd-deDt that comprises also a Hilbert Spectral Analysis and an...
Platforms: Matlab
License: Freeware | Size: 10 KB | Download (47): Empirical Mode Decomposition Download |
This software has been realized at the CNS Technology Lab at Boston University - http://techlab.bu.edu. The main author of this software is Chaitanya Sai ( http://techlab.bu.edu/members/sai/ ).CONFIGR (CONtour FIgure GRound) is a computational model based on principles of biological vision that...
Platforms: Matlab
License: Freeware | Size: 256 KB | Download (41): CONFIGR (CONtour FIgure and GRound) Download |
TYPECAST and TYPECASTX are mex functions intended to mimic the MATLAB intrinsic typecast function with extensions. These C-mex versions of typecast differs from the intrinsic typecast in the following important aspects: Intrinsic typecast------------------Type of copy: Deep Data CopyAllows...
Platforms: Matlab
License: Freeware | Size: 10 KB | Download (40): typecast and typecastx C-mex functions Download |
Reshapes an array like the MATLAB intrinsic reshape function. But reshape0 does not require that the total number of elements must remain the same. If the new array is larger, then it will be zero or blank padded. If the new array is smaller, then it will be a truncated...
Platforms: PHP
License: Freeware | Size: 10 KB | Download (52): reshape0, reshaping with padding or truncating Download |
The PHP JPEG Metadata Toolkit is free and Open Source PHP Project designed to allow manipulation of many types of metadata that reside in a JPEG image file. Five types of metadata that can be accessed by this project:- EXIF, DCF & TIFF/EP including makernotes: Contains Digital Camera Settings....
Platforms: PHP
License: Freeware | Size: 296.96 KB | Download (43): The PHP JPEG Metadata Toolkit Download |
PathVisio is a tool for displaying and editing biological pathways. In a sense PathVisio lets you draw pathways as you would in any drawing program, like PowerPoint or Photoshop. But the difference is that PathVisio can understand the biological context of a pathway, because you can link...
Platforms: Mac
License: Freeware | Size: 10.24 KB | Download (35): PathVisio Download |
SVG support is one of the most requested features for . There are two options, either SVG import for manipulating SVG graphics within as described in Issue:2497, or embedding SVG graphics "display-only" within documents as described in Issue:49991. Both options have their intrinsic benefits and...
Platforms: *nix
License: Freeware | Size: 5.6 MB | Download (36): SVG Import Download |
GeXpert is an expert system that can be used for genetics and metabolic pathway analysis. GeXpert can help Biotechnologists do their work faster, reducing the time required for performing, analyzing and storing the results of Bioinformatics research.
Platforms: *nix
License: Freeware | Size: 41.58 MB | Download (35): GeXpert Download |
Displays graphs of algebraic functions in a variety of forms. These include polar and cartesian co-ordinates, parametric and intrinsic functions. A wide range of functions are built-in, from simple trig and hyperbolic functions to things such as the ceil and gamma functions. On-screen HTML help...
Platforms: Windows
License: Freeware | Size: 150 KB | Download (316): Descartes Download |
Useful hints-and-tips for programmers of Visual Basic. Topics covered are - General programming tips:- Applying a minimum size to resizable forms. Working with the intrinsic VB controls; Select the content of textbox and combobox controls on GotFocus. Windows API;- Creating a scrollable text...
Platforms: Windows
License: Freeware | Download (580): Visual Basic Hints-and-Tips Download |
Rock Face is a moment that`s full of colour and impact, that reflects the typical rock walls of the Yosemite National Park, in the USA. Apart from the photo`s intrinsic beauty and perspective, the image is outstanding above all for its colour.This Yosemite National Park wallpaper is 1024x768...
Platforms: Windows
License: Freeware | Size: 1024 B | Download (109): Rock Face Download |