Imagej

ImageJ is an intersting Java based image processing application inspired by NIH Image for the Macintosh. It runs, either as an online applet or as a downloadable application, on any computer with a Java 1.1 or later virtual machine. It can display, edit, analyze, process, save and print 8-bit,... Platforms: Windows

Yawi3D (Yet Another Wand for ImageJ 3D) is a software project for the implementation of tools uselful in the supervisioned sampling of tumoral masses in CT images. It enables and simplifies the selection of a tumoral region on each slice of a CT analysis, and computes the volume of the selected... Platforms: *nix

This is a collection of ImageJ macros (scripts) for performing color deconvolution and analysis of immunohistochemistry (IHC) staining on tissue microarray (TMA) images Platforms: Windows, Mac, Linux

Fiji is an image processing package based on ImageJ. Platforms: Windows, Mac, Linux

This project is the development of a Selection Tool primarely used in ImageJ and possibly in GIMP. It is based in LiveWire and SNAKES methods and will firstly be used in IVUS (intravascular ultra sound) images. Platforms: Windows, Mac, Linux

Parallel HRRT Deconvolution is a multithreaded ImageJ plugin for motion correction of PET brain images. Platforms: Windows, Mac, Linux

Parallel Iterative Deconvolution is a multithreaded ImageJ plugin for iterative image deblurring. Platforms: Windows, Mac, Linux

Parallel Spectral Deconvolution is a multithreaded ImageJ plugin for spectral image deblurring. Platforms: Windows, Mac, Linux

SMOOTHN provides a fast, unsupervised and robust discretized spline smoother for data of any dimension.SMOOTHN(Y) automatically smoothes the uniformly-sampled array Y. Y can be any N-D noisy array (time series, images, 3D data,...).SMOOTHN can deal with missing (NaN) values (see screenshot, top... Platforms: Matlab

ImageJA is a fork of ImageJ, i.e. it is synchronized closely with ImageJ, but has a few things on top: When run as an applet, ImageJA is embedded (slated to be _optionally_ embedded, once the maintainer finds some time to do it). The internal structure of ImageJA's recorder allows command... Platforms: *nix

Mistral is a high-level imaging engine for the Java Standard Edition platform (J2SE). Mistral project has been designed as an abstraction layer over the real imaging engine, that can be freely choosen among one of the most popular around (e.g. JAI, ImageJ), thus allowing the programmer to focus... Platforms: *nix

Micro-Manager is an Open Source software package for imaging and control of automated microscopes on multiple platforms (Windows, Mac and Linux). Together with ImageJ, a popular image processing package, μManager provides a comprehensive imaging solution – comparable to commercially... Platforms: *nix

Quantian distribution is a remastering of Knoppix, the self-configuring and directly bootable dvd/cdrom that turns any pc or laptop (provided it can boot from cdrom/dvd) into a full-featured Linux workstation. Recent versions of Quantian are based on clusterKnoppix and add support for... Platforms: *nix

Server-client apps that can access DCM4CHEE Dicom images using WADO. The client has an image viewer that is capable of render 2D, 3D and MPR images from DICOM datasets. Based on DCM4CHE and ImageJ. Download Turyon Client and Server (View all files) Platforms: Windows, Mac, Linux