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Bio::Tools::Run::PiseApplication::fasta is a Bioperl class for sequence database search. Parameters: fasta (Excl) Fasta program query (Sequence) Query sequence File pipe: seqfile seqtype (Excl) Is it a DNA or protein sequence (-n) protein_db (Excl) Protein Database nucleotid_db... Platforms: *nix

Bio::Tools::Run::PiseApplication::align2model is a Bioperl class for align2model - create a multiple alignment of sequences to an existing model. Parameters: align2model (String) run (String) Run name db (Sequence) Sequences to align (-db) model_file (InFile) Model (-i) pipe:... Platforms: *nix

Bio::Tools::Run::PiseApplication::consensus is a Perl module. Bioperl class for: CONSENSUS Identification of consensus patterns in unaligned DNA and protein sequences (Hertz, Stormo) References: G.Z. Hertz and G.D. Stormo. Identification of consensus patterns in unaligned DNA and protein... Platforms: *nix

Bio::Tools::Run::PiseApplication::charge is a Perl module. Bio::Tools::Run::PiseApplication::charge Bioperl class for: CHARGE Protein charge plot (EMBOSS) Parameters: (see also: http://bioweb.pasteur.fr/seqanal/interfaces/charge.html for available values): charge (String) init... Platforms: *nix

Home Media Librarian provides an application to catalog records, CDs, DVDs, etc. HML is a pure Java client(GUI) application to catalog records, cds, dvds, etc. HML requires a JDBC compliant database and driver. The application is for the average person whom has a record, cd, dvd, tape, etc.... Platforms: *nix

ATA over Ethernet Tools are intended for use in conjunction with an ATA over Ethernet (AoE) driver for a Linux 2.6 kernel. They perform simple tasks like listing available devices, triggering device discovery, and restricting the network interfaces on which AoE is performed. Whats New in This... Platforms: *nix

Aero AIO: Folding@Home is a plugin for Aero AIO to monitor your Folding@Home client. It comes with a simple configuration dialog to set the update interval and client path. It was inspired by navyrains folding-karamba theme. Folding@Home is a distributed computing project to understand... Platforms: *nix

The ICMP Hostname Tools for Linux include a responder daemon, a lookup tool, and a nameswitch module to handle ICMP host name functions. The NSS module caches all requests (including failures) and honors the TTL value sent by the responding host. It uses a configuration file called... Platforms: *nix

The mjpeg programs are a set of tools that can do recording of videos and playback, simple cut-and-paste editing and the MPEG compression of audio and video under Linux. Recording is supported for the Zoran based cards like the Buz (Iomega), DC10 (MIRO, Pinnacle), Matrox Marvel cards and the... Platforms: *nix

Cmos password recovery tools decrypts password stored in cmos used to access BIOS SETUP. Works with the following BIOSes: - ACER/IBM BIOS - AMI BIOS - AMI WinBIOS 2.5 - Award 4.5x/4.6x/6.0 - Compaq (1992) - Compaq (New version) - IBM (PS/2, Activa, Thinkpad) - Packard Bell - Phoenix... Platforms: *nix

Heirloom Development Tools package provides yacc, lex, m4, make, and SCCS as portable derivatives of the utilities released by Sun as part of OpenSolaris. The OpenSolaris utilities were in turn derived from the original Unix versions, and are assumed be conforming implementations of the POSIX... Platforms: *nix

lopster-tools is a set of tools for use with Lopster that allows users to view statistics for download and upload transfer, incomplete and finished files, how many MB are downloaded or uploaded, and the difference between down- and upload, amongst other features.. Get KLopsterUtils at... Platforms: *nix

The net-tools package contains a collection of programs that form the base set of the NET-3 networking distribution for the Linux operating system. It contains the important tools for controlling the network subsystem of the Linux kernel including arp, hostname, ifconfig, netstat, rarp and... Platforms: *nix

Bio::Tools::Run::PiseApplication::freak is a Perl module. Bio::Tools::Run::PiseApplication::freak Bioperl class for: FREAK Residue/base frequency table or plot (EMBOSS) Parameters: (see also: http://bioweb.pasteur.fr/seqanal/interfaces/freak.html for available values): freak... Platforms: *nix

Oasis XML Tools is a small utility to easily manage OpenOffice.org documents at xml level from outside OpenOffice.org suite. You can view and edit (with kwrite) the main xml files present in OpenOffice.org documents and update these documents with the changes. Also you can compare two or... Platforms: *nix

File::Save::Home is a Perl module to place file safely under user home directory. SYNOPSIS use File::Save::Home qw( get_home_directory get_subhome_directory_status make_subhome_directory restore_subhome_directory_status conceal_target_file reveal_target_file make_subhome_temp_directory... Platforms: *nix

Mail::Digest::Tools is a Perl module that has tools for digest versions of mailing lists. SYNOPSIS use Mail::Digest::Tools qw( process_new_digests reprocess_ALL_digests reply_to_digest_message repair_message_order consolidate_threads_multiple consolidate_threads_single... Platforms: *nix

The Ionflux Tools Class Library is a lightweight multi-platform C++ framework designed for rapid development of applications in a client/server architecture. The Ionflux Tools Class Library is released under the GNU General Public License, meaning it is free software! (See LICENSE in the... Platforms: *nix

Blu-ray video authoring tools package is a free open source suite of Blu-ray (BD-R and BD-RE) authoring tools that allow you to produce Blu-ray video discs. mkudfiso (Blu-ray authoring tool set), a utility to create ISO images containing a pure UDF filesystem, intended primarily for Blu-ray... Platforms: *nix

Bio::Tools::Run::JavaRunner is a Perl module that can run java programs. SYNOPSIS my $runner = Bio::Tools::Run::JavaRunner->new(-jar => $jar); $runner->run(); This module is probably incomplete. It is intended to be a wrapper for running java programs.. Platforms: *nix