Genetic Transformation

GAJET (Genetic Alrogithm for Java Evolutionary Testing) is an automatic test generation tool for Java that uses a genetic algorithm. GAJET project uses EMMA to measure test coverage.. Get GAJET at SourceForge.net. Fast, secure and free downloads from the largest Open Source applications and... Platforms: *nix

JGAP (pronounced "jay-gap") is a genetic algorithms component written in the form of a Java package. JGAP project provides basic genetic mechanisms that can be easily used to apply evolutionary principles to problem solutions. The ground is laid for introducing Genetic Programming to JGAP in the... Platforms: *nix

Crogai consists of a mixture of crowd simulation, AI, and genetic algorithms. It is possible to set up simulations and test different AI in a full 3D environment with a small physics engine, terrain, collision handling, etc. Crogai is inspired by the OpenSteer projet and uses steering behaviors... Platforms: *nix

PGAPy is a wrapper for pgapack, the parallel genetic algorithm library, a powerfull genetic algorithm library by D. Levine, Mathematics and Computer Science Division Argonne National Laboratory. The library is written in C. PGAPy wraps this library for use with Python. The original pgapack... Platforms: *nix

Acovea implements a genetic algorithm for finding the "best" options for compiling programs with the GCC C and C++ compilers. ACOVEA (Analysis of Compiler Options via Evolutionary Algorithm) implements a genetic algorithm to find the "best" options for compiling programs with the GNU Compiler... Platforms: *nix

XML::XPathScript::Processor is the XML transformation engine in XML::XPathScript. SYNOPSIS In a stylesheet ->{testcode} sub for e.g. Docbooks < ulink > tag: my $url = findvalue(@url,$self); if (findnodes("node()", $self)) { # ... $t->{pre}=qq< a href="$url" >; $t->{post}=qq< /a >;... Platforms: *nix

Images Generator is image-editing application to which any of the following definitions can be applied: graphic editor, 3D images creator, portraits creator, Art creator. In Images Generator the small sizes and convenience of using are combined with ample opportunities. The program has a full... Platforms: Windows, Other

X-SQLT Command-line Processor is an easy to use, fast and resource-friendly utility, that allows you to perform data selections, conversion and transformation tasks by using generally available technologies, like ADO DB, MSXML and WSH, and by supporting common data formats (XML, CSV and JSON) and... Platforms: Windows

This program, BayeScan aims at identifying candidate loci under natural selection from genetic data, using differences in allele frequencies between populations. BayeScan is based on the multinomial-Dirichlet model. One of the simplest possible scenarios covered consists of an island model in... Platforms: Windows, Mac, Linux

Iterated Darboux is a small, simple application specially designed to help you investigate the discrete Darboux transformation of a planar polygonal curve. The four vertices of all quadrilaterals in the evolution have fixed cross ratio. You may change the value of their cross ration on the... Platforms: Windows

UNPHASED is a small, simple, Java based application specially designed to offer users a versatile tool for performing genetic association analysis. This utility implements maximum-likelihood inference on haplotype and genotype effects while allowing for uncertain phase and missing genotypes.... Platforms: Windows

Recodon is a population genetic simulator that generates samples of nucleotide and codon sequences from populations with recombination, migration and growth. The last version includes new codon models (M1, M7 y M8) and new output options. Platforms: Windows

Schilduil Proc Inbreeding was built as a calculator for inbreeding coefficients and additive genetic relationships that are based on pedigree. The elements of the relationship matrix represent the additive genetic relationship between two individuals. This is a number between 0 and 2. The... Platforms: Windows

Strudel is a graphical utility designed to help you visualize genetic and physical maps of genomes for comparative purposes. The application aims to let the user examine their data at a variety of different levels of resolution, from entire maps to individual markers, and explore syntenic... Platforms: Windows, Windows Vista, 7

Toolkit for processing genetic data. Currently supports (command-line): Half-IBD (Identity by descent) aka HIRs - between 2 or any number of files (in distances and cM); RAW2PED, PED2RAW conversions; regions of homozygousity and other converters. Platforms: Mac

RECODER is a Java framework for Java program analysis and source code transformation. RECODER computes an easy to use syntactic and semantic program model containing cross references and also supports transformation rollbacks and incremental model updates. Platforms: Mac

The script finds a (near) optimal solution to a variation of the "open" M-TSP by setting up a GA to search for the shortest route (least distance needed for each salesman to travel from the start location to unique individual cities and finally to the end location).Each salesman starts at the... Platforms: Windows, Mac, *nix, Matlab, BSD Solaris

Finds a (near) optimal solution to a variation of the M-TSP by setting up a GA to search for the shortest route (least distance needed for each salesman to travel from the start location to individual cities and back to the original starting place).Each salesman starts at the first point, and... Platforms: Windows, Mac, *nix, Matlab, BSD Solaris

The algorithm computes the optimal route from a fixed predetermined starting point to all other cities without returning to the starting point. Requirements: - MATLAB 7.6 or higher Platforms: Windows, Mac, *nix, Matlab, BSD Solaris

Charlemagne is a genetic programming application which aims to be highly configurable and applicable to a broad range of problems.It is written in Python and Lisp and to some degree is extensible in both languages. It features built-in input-output mapping support, but also provides the ability... Platforms: *nix, Python, BSD