Exploratory

exploRase was specially designed as an Open Source R-based instrument for the exploratory multivariate analysis of Systems Biology data. It provides a GUI on top of the analysis functionality provided by R and the Bioconductor project. exploRase is designed to be accessible to biologists... Platforms: Windows

A modern, interactive, Mac OS X Universal graphing application, providing: - A rich variety of graph types with numerous styles of data representation - Real-time, two-way interaction with data, enabling simultaneous data visualization and graphing from multiple worksheets - Exploratory tools... Platforms: Mac

This a very simple function that produces a condensed, approximate version of the time-series signal y, with each group of n adjacent points in y replaced by its average. You can use this to condense over-sampled signals so that subsequent processing will be easier and faster. Or you can use it... Platforms: Matlab

VisTrails is a new scientific workflow management system. Recently, workflows have been emerging as a paradigm for representing and managing complex computations. Workflows can capture complex analyses processes at various levels of detail and provide the provenance information necessary for... Platforms: *nix

Quantifies the visual scree test to determine the number of factors to retain in exploratory factor analysis. Platforms: Mac

Python's IDLE was designed in order to provide an environment with an elegant minimalism that allows you to write Python code. It is accessible to those beginning programming in addition to being useful to advanced programmers. IdleX provides some additional functionality to IDLE and... Platforms: Windows

A Program for Statistical Analysis and Matrix Algebra MacAnova is a free, open source, interactive statistical analysis program for Windows, Macintosh, and Linux written by Gary W. Oehlert and Christopher Bingham, both of the School of Statistics, University of Minnesota. In spite of its... Platforms: Windows, Mac, Linux

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GGobi is an open source visualization program for exploring high-dimensional data. It provides highly dynamic and interactive graphics such as tours, as well as familiar graphics such as the scatterplot, barchart and parallel coordinates plots. Plots are interactive and linked with brushing and... Platforms: Mac

Microarray Explorer (MAExplorer) is a Java-based data-mining facility for cDNA or oligonucleiotide microarray databases. It may be downloaded and run as a stand-alone application on your computer. Its exploratory data analysis environment provides tools for the data-mining of quantitative... Platforms: *nix

segtools is a Python library designed to put genomic segmentations back in the context of the genome! Using R for graphics, segtools provides a number of modules to analyze a segmentation in various ways and help you interpret its biological relevance. Segmentations should be in BED format, with... Platforms: *nix