Conjugation Dna

Find restriction enzymes that help differ known homologe DNA sequences (RFLP). Simulate electrophoresis gels. Usefull to investigate the diversity of a population by one of their common genes. Written in perl, uses bioperl modules and the GD library. Platforms: Windows, Mac, Linux

The TandemSearcher is a Java based application for searching for tandem repeats in the DNA sequences. It is based on the Burrows-Wheeler Transform (BWT). Platforms: Windows, Mac, Linux

TaxonDNA is a simple but extensible system for performing simple DNA (and other) sequence manipulations in Java. We hope to create a simple framework which can be quickly extended to create bioinformatics applications. Platforms: Windows, Mac, Linux

The YeastsIdentification is a Java based application for searching for unique DNA sequences. It is based on the Burrows-Wheeler Transform (BWT). Platforms: Windows, Mac, Linux

NCBI has an implementation of BLAST algorithm on their website at www.ncbi.nlm.nih.gov/BLAST, which is good if you want to query short DNA or protein sequence against various sequence databases. The problem arises when large sequences need to be BLAST'ed against a sequence database or against... Platforms: Matlab

MOTIFINFO = GIBBSMOTIFSAMPLER(SEQARRAY,MOTIFVECTOR,ALPHABET,OPTIONS) Searches for the motifs in a set of sequences via Gibbs sampling. seqArray is a cell vector of sequence strings. motifVector is a vector of uniformly-spaced motif widths you wish to optimize. The program iterates over these... Platforms: Matlab

MCGH is a Matlab toolbox with graphical interface to analysis DNA microarray-based comparative genomic hybridization (CGH) experiments. CGH on DNA microarray enable us to measure the copy numbers of thousands of genes through the genome. M-CGH allows us to visualize the copy number changes... Platforms: Matlab

To further understand the implementation of hyperparameters re-estimation technique in Bayesian hierarchical model, we added two more prior assumptions over the weight in BayesPI, namely Laplace prior and Cauchy prior, by using the evidence approximation method. In addition, we divided... Platforms: Matlab

This year's art gallery has an evolutionary theme, beginning with the fight or flight evolutionary strategies, then moving on to the effects of ancestral and alien DNA, and the hunter-gatherer survival technique. Some of the entries in this year's art gallery have warning stickers on. One kind... Platforms: Mac

A GUI program to create the plasmid database forms for BGME lab. This program presents user with a data entry form for entering plasmid information and automatically converts DNA sequence to protein, aligns it, and creates text output file. Platforms: Mac

Gene Studio is a free tool for modelling of DNA manipulation. It will allow to work with vectors, to design primers, to clone molecules and provide user friendly intewrface. Platforms: Mac

SeqTEx: identification of average Next-Generation Sequence DNA length from cross-correlation This project is in development and will be submitting the manuscript soon. Check back for more information about using this program later. Platforms: Mac

JMotifFinder is a small graphical utility I wrote to quickly find DNA Motifs such as Primers in huge EMBL Files. If you load an EMBL file containing exon and mRNA information into JMotifFinder, it will graphically display the location of the exons and mRNA within the source sequence. You can... Platforms: Mac

This year's art gallery has an evolutionary theme, beginning with the fight or flight evolutionary strategies, then moving on to the effects of ancestral and alien DNA, and the hunter-gatherer survival technique. Some of the entries in this year's art gallery have warning stickers on. One kind... Platforms: Mac

This year's art gallery has an evolutionary theme, beginning with the fight or flight evolutionary strategies, then moving on to the effects of ancestral and alien DNA, and the hunter-gatherer survival technique. Some of the entries in this year's art gallery have warning stickers on. One kind... Platforms: Mac

This year's art gallery has an evolutionary theme, beginning with the fight or flight evolutionary strategies, then moving on to the effects of ancestral and alien DNA, and the hunter-gatherer survival technique. Some of the entries in this year's art gallery have warning stickers on. One kind... Platforms: Mac

This year's art gallery has an evolutionary theme, beginning with the fight or flight evolutionary strategies, then moving on to the effects of ancestral and alien DNA, and the hunter-gatherer survival technique. Some of the entries in this year's art gallery have warning stickers on. One kind... Platforms: Mac

This year's art gallery has an evolutionary theme, beginning with the fight or flight evolutionary strategies, then moving on to the effects of ancestral and alien DNA, and the hunter-gatherer survival technique. Some of the entries in this year's art gallery have warning stickers on. One kind... Platforms: Mac

This year's art gallery has an evolutionary theme, beginning with the fight or flight evolutionary strategies, then moving on to the effects of ancestral and alien DNA, and the hunter-gatherer survival technique. Some of the entries in this year's art gallery have warning stickers on. One kind... Platforms: Mac

This year's art gallery has an evolutionary theme, beginning with the fight or flight evolutionary strategies, then moving on to the effects of ancestral and alien DNA, and the hunter-gatherer survival technique. Some of the entries in this year's art gallery have warning stickers on. One kind... Platforms: Mac