Biology Workbench

BioJava is a tool that includes objects for manipulating biological sequences and file parsers. It also features a DAS client and server support, access to BioSQL and Ensembl databases, tools for making sequence analysis GUIs and powerful analysis and statistical routines including a dynamic...

eTests is a PHP/MySQL web-based platform allowing to set formative evaluations using multiple choice questions. It has been developed during a Phd in education at the University of Namur (Belgium), in the Unit of Didactic of Biology ( http://www.fundp.ac.be/sciences/biologie/umdb ). To the...

A Java workbench and toolkit for developing, evaluating, and playing with classical and state-of-the-art optimization algorithms on standard benchmark problem domains; including reference algorithm implementations, graphing, visualizations and much more.


Platforms: Windows, Mac, Linux

EMS SQL Management Studio 2011 for Oracle is a powerfull software collection that allows you to manage Oracle databases. With components that focus on all critical Oracle database management tasks, SQL Studio is a single workbench that provides you with must-have tools for administering Oracle...


Platforms: Windows, 2K, XP, 2003, Windows Vista, 2008, 7, 7x64

"Dynamical Systems with Applications using MATLAB" covers standard material for an introduction to dynamical systems theory. The text deals with both discrete and continuous systems.There are applications in mechanical systems, chemical kinetics, electric circuits, interacting species, economics,...


Platforms: Matlab

It is obvious, that education had always been the best possible investment. And, so are the educational tools. Whether you are designing an application for schedule management, a school web-site, or just customizing your desktop to help you learn, a bright and stylish set of Desktop Education...


Platforms: Mac

Free video screencam tutorials for Eclipse and Java. Includes 'Eclipse and Java for Total Beginners', 'Using the Eclipse Workbench', 'Introducing Persistence', and 'Using the Debugger'. Intended for beginning and intermediate users and programmer


Platforms: Windows, Mac, BSD, Linux

Enables a DBA, developer, or data architect to visually design, generate, and manage all types of databases including Web, OLTP, and data warehouse databases. It includes everything a data modeler needs for creating complex ER models, and also delivers key features for performing difficult change...


Platforms: Mac

A Molecular Biology software that provides tools with an intuitive interface to assists you in DNA cloning, sequence analysis and visualization. Serial Cloner 2.1 handles Features/Annotations and now allows to define, import and export, customized lists of Features. User can annotate any sequence...


Platforms: Mac

BiOrbit is a small Biological information project -- scripts and other useful stuff for the IT & Biology world.


Platforms: Windows, Mac, Linux

HalX is a LIMS (Laboratory Information Management System). It is meant to be able to keep track of all the experimental details of any type of biochemical, molecular biology or structural biology experiment (but not all are available now...)


Platforms: Windows, Mac, Linux

Using super-fast, integrated, high-performance computing algorithms, CLC Genomics Workbench sets a new standard for desktop based reference assembly and de novo assembly of SOLiD, Solexa, 454, and Helicos sequencing data# De novo assembly of Sanger, 454, Solexa, Helicos, and SOLiD data -...


Platforms: Mac

A bioinformatics program for advanced RNA sequence analysis. All analyses are fully integrated in one single, user-friendly, and intuitive software application. Some analyses are: - Secondary structure prediction - Graphical view and editing of secondary structure - Tabular view of structures...


Platforms: Mac

The performance of the level set segmentation is subject to appropriate initialization and optimal configuration of controlling parameters, which require substantial manual intervention. A new fuzzy level set algorithm is proposed in this paper to facilitate medical image segmentation. It is able...


Platforms: Matlab

EclEmma is a free Java code coverage tool for Eclipse, available under the Eclipse Public License. It brings code coverage analysis directly into the Eclipse workbench. The EclEmma project is also the home of the JaCoCo code coverage library which is the technical back-end for EclEmma and also...


Platforms: Windows, Mac, BSD, Linux

Database Workbench offers features not found in vendor tools and is a fast performing native Windows tool. FEATURES: InterBase Support: · InterBase 5.5 and up supported · Design & develop from a single tool · Connect to InterBase Server on multiple platforms Unique tools: ·...


Platforms: Windows

DBEdit is a plugin for the Eclipse Workbench. It can be used to explore databases, edit tables directly with a spreadsheet like editor, edit SQL und more.


Platforms: Windows, Mac, Linux

The HSQLDB Plug-in embebs a HSQLDB pure-java database server into the Eclipse workbench for use as a data repository for Java applications developed using the IDE or for extending HSQLDB itself


Platforms: Windows, Mac, Linux

The Systems Biology Results Markup Language is a language describing data. Unlike flat data formats, SBRML allows describing the origin of the data as well. This project hosts a library and tools for using SBRML.


Platforms: Windows, Mac, Linux

A protein / macromolecule visualization tool that runs as a screensaver module. It colorfully renders PDB (Protein Data Bank) files using unique algorithms. The module automatically annotates, colors, and rotates structures for an educational and captivating display. Show off your research or...


Platforms: Mac