Molecular Models

Hata and COST231-Hata Propagation Models. Two functions and two test scripts (with plots). Platforms: Matlab

This toolbox was designed to simulate and fit linear state space models. The main literature I used for this particular package is Kim and Nelson (1999). A state space model (without non stochastic coefficients) is given by:y(t)=beta(t)*x(t)'+e(t)... Platforms: Matlab

With improvements in signal processing some new models with enhanced features are made available.TVAR is on similar pattern.This model is better than conventional am-fm model in some respect as it facilates the implementation of same algo on various signals bearing different parameters. Use of... Platforms: Matlab

A .zip file contains a series of scripts that were used in the MathWorks webinar "Using MATLAB to Develop Portfolio Optimization Models." The scripts generate 3D efficient frontiers for a universe of 44 stocks with time as the third axis. Additional scripts perform various ex-ante and ex-post... Platforms: Matlab

gOpenMol is a tool for the visualization and analysis of molecular structures and their chemical properties. The program uses Tcl/Tk scripting engine and can thus be easily extended without modifying the kernel code. gOpenMol can also be extended by writing extensions using sharable objects... Platforms: *nix

Amira is a powerful, multifaceted software platform for visualizing, manipulating, and understanding Life Science and bio-medical data coming from all types of sources and modalities. Amira is the leading software solution that satisfies even your most demanding needs to work with clinical or... Platforms: Windows

Models! is a flexible diagramming tool. It doesn’t force you to follow strict, often useless rules for creating your models. Instead, it focuses on providing simplicity and beauty to the software design activity. Models features post-it notes, grids and alignment tools, coloring, formatting and... Platforms: Mac

Interleaved, Successive Approximation, and Pipelined Sub-Ranging ADC models. These models are typical of the architectures used for high speed analog to digital converters. Platforms: Matlab

Little b is a Lisp-based language which allows scientists to build shareable, reusable mathematical models of complex systems based on shared parts. The initial focus is molecular and multicellular networks.Project web page: http://www.littleb.org Platforms: Windows, Mac, Linux

Hidden Markov models are used to describe the "stepping" behavior of molecular motors, as measured by single-molecule fluorescence techniques. Our HMM implementation is more versatile than the one described by Milescu, et al. Biophys. J. 91:3135-3150 and can be used as a "blind" step detector or... Platforms: Matlab

- This demo supports R2006a -> R2010aSimulink plant and controller models are used with LEGO's latest high-tech robot (ARM-based LEGO Mindstorms NXT) to illustrate industrial application of Model-Based Design with Production Code Generation. Take note of the model architecture and component... Platforms: Matlab

This submission includes functions and scripts for the estimation and simulation of ACD (autoregressive conditional duration) models. The zip file includes: - Scripts and functions for Estimation of an ACD(q,p) model with exponential or weibull distribution- Scripts and functions for Simulation... Platforms: Matlab

Airlib is a library of aircraft models to be used with Simulink 3.1 (MATLAB 5.3) or later (tested on 6.1 & 6.5).It is based on two basic blocks that implement a continuous-time and a discrete-time nonlinear general aircraft model. Both blocks are largely based on the FDC toolbox, written by Marc... Platforms: Matlab

An essential step in embedded software development, floating- to fixed-point conversion can be tedious, labor-intensive, and error-prone. System engineers frequently design algorithms in floating-point math, usually double-precision. This format represents the ideal algorithm behavior but takes... Platforms: Matlab

This Program is the implementation of the paper"An Improved Hybrid Model for Molecular Image Denoising"Original Paper can be downloaded from : www.springerlink.com/index/g31k52277220rvu8.pdfCopies of the paper available... Platforms: Matlab

These models work with the time domain discrete dynamic response of a NDoF system. The Spatial Model directly identifies stiffness and damping matrices from restoring forces and displacements and is useful for monitoring damping alterations in the response of a pseudo-dynamic test. See the paper:... Platforms: Matlab

These functions show some advances about MPF (Matrix Polynomial Fraction) using for represent multivariable models and design multivariable control system. Platforms: Matlab

This is a MATLAB(R) implementation of the ideas discussed in Lopez-Calva, G. and K. Shea, "Fitting Survival Probability Models," WILMOTT Magazine, issue 45, pp. 16-22.We estimate the parameters of three different survival probability models based on credit default swap (CDS) spreads. The... Platforms: Matlab

ORMA (Oligonucleotide Retrieving for Molecular Applications) is a series of integrated scripts in Matlab, which performs an accurate search of all the positions able to specifically discriminate one species among homologous ones. ORMA also performs an accurate selection of high-quality... Platforms: Matlab

PFMD performs a Molecular Dynamics simulation of some polarizable fluids at the liquid state by means of a dissociable potential. Supported molecules are H2O (water) and MX3, where M is a metal among Al, Fe, or Ga and X is a halogen among Cl, Br, or I. Platforms: Windows, Mac, Linux