Matrices

Java archive containig classes for calculations with polynomials, matrices and vectors + several applets using these classes. Platforms: ALL

Bio::Tools::Run::PiseApplication::consensus is a Perl module. Bioperl class for: CONSENSUS Identification of consensus patterns in unaligned DNA and protein sequences (Hertz, Stormo) References: G.Z. Hertz and G.D. Stormo. Identification of consensus patterns in unaligned DNA and protein... Platforms: *nix

PDL::MatrixOps Perl module contains some useful Matrix operations. SYNOPSIS $inv = $a->inv; $det = $a->det; ($lu,$perm,$par) = $a->lu_decomp; $x = lu_backsub($lu,$perm,$b); # solve $a x $x = $b PDL::MatrixOps is PDLs built-in matrix manipulation code. It contains utilities for many... Platforms: *nix

LFMats goal is to furnish convenient matrix tools for the finite element methods. Actually, theres a lot of libraries for linear algebra on the net, but it seems that its still hard to find flexible and high performance free software for the required procedures (genericity, speed, adaptated... Platforms: *nix

Algorithm::Munkres is a Perl extension for Munkres solution to classical Assignment problem for square and rectangular matrices. This module extends the solution of Assignment problem for square matrices to rectangular matrices by padding zeros. Thus a rectangular matrix is converted to square... Platforms: *nix

Bio::NEXUS::MatrixBlock is a Perl module that provides functions for handling blocks that have matrices. SYNOPSIS This module is the super class of Characters, Unaligned, and Distances block classes, and indirectly it is a super-class of Data and History blocks, which are both sub-classes of... Platforms: *nix

Math::Matrix can multiply and invert Matrices. The following methods are available: new Constructor arguments are a list of references to arrays of the same length. The arrays are copied. The method returns undef in case of error. $a = new Math::Matrix ([rand,rand,rand],... Platforms: *nix

Seldon is a C++ library for linear algebra. Seldon provides matrix and vector structures, and some methods and functions for computations (linear algebra). Seldon is designed to be efficient and convenient, which is notably achieved thanks to template classes. Exception handling and several debug... Platforms: *nix

Maxima is a system for the manipulation of symbolic and numerical expressions, including differentiation, integration, Taylor series, Laplace transforms, ordinary differential equations, systems of linear equations, polynomials, and sets, lists, vectors, matrices, and tensors. Maxima yields high... Platforms: Mac, Linux

rxncon is a specialized program that's been designed to generate contingency matrices. rxncon can also generate graphical representations of biochemical signaling networks. As its input it uses specially formatted Excel files. To start using rxncon you first have to upload a specially formated... Platforms: Windows

DynaMaSZ 2 is a professional application designed to enable you to generate 3D fractal images based on multi-dimensional matrices. The user can select a dimension from 3X3 to 12X12. Whole matrix algebra makes possible the extension of the algorithms first introduced in the original DynaMaSZ,... Platforms: Windows

Dew Lab Studio includes Dew Math library and additional signal analysis (Dew Signal) and statistical analysis (Dew Stats) add-on packages. Features include: - fast object oriented numerical library for VS2005, VS2008, VS2010, VS2012, VS2013 - support for 64bit native mode - take advantage... Platforms: Windows, Windows 8, Windows 7, Windows Server

The element calculates determinants, linear equation systems and generates matrices. It provides additional basic functionality like faculty, subdeterminant and matrix reduction calculations. Further more an event is implemented to support a progress bar for time intensive operations. The... Platforms: Windows

Shows the content of matrices, that are given as two-dimensional arrays. This can be done both in runtime mode and in design mode. The element itself is invisible. It shows a form to give out the matrix content. The matrix display for example serves debugging purposes. Platforms: Windows

Maxima is a system for the manipulation of symbolic and numerical expressions, including differentiation, integration, Taylor series, Laplace transforms, ordinary differential equations, systems of linear equations, polynomials, and sets, lists, vectors, matrices, and tensors. Maxima yields high... Platforms: Windows

The JSparse Matrix Package, developed by Philipp GeigenmALller during an internship at the prudsys AG in Chemnitz, Germany, is an extension of the well-known Java Matrix Package (JAMA) and allows the use of sparse matrices and related algorithms. Platforms: Windows, Mac, Linux

MatrixGen is a Bioinformatics application used to generate scoring matrices from analysis of aligned Amino Acid and DNA data sets. These matrices can then be used by Clustal to generate more accurate alignments. Based upon the Henikoff BLOSUM method. Platforms: Windows, Mac, BSD, Linux

Dependency Structure Matrices (DSMs) are very useful in the analysis and verification of software architectures because they allow the analyst to more easily understand inter-module dependencies than traditional box and arrow techniques which become impossible to use for all but the simplest... Platforms: Windows, ASP.NET,

This is a templated library of numerical base classes which implement basic data structures like complex numbers, dynamic vectors, static vectors, different types of matrices like full matrices, band matrices, sparse matrices, etc. and also included a representation for Tensors and its typical... Platforms: Windows, Mac, *nix, C/C++, BSD Solaris

The zip file contains1. A 128x256 Regular (3,6) H matrix (if you need to simulate other codes, need to write your own code for generating those parity check matrices). The file '128x256regular_v6.mat' is for those using Matlab 6.5.2. Files for LDPC code simulation over the AWGN channel.3.... Platforms: Matlab