Highlight Tools

Bio::Tools::Run::PiseApplication::align2model is a Bioperl class for align2model - create a multiple alignment of sequences to an existing model. Parameters: align2model (String) run (String) Run name db (Sequence) Sequences to align (-db) model_file (InFile) Model (-i) pipe:... Platforms: *nix

Bio::Tools::Run::PiseApplication::consensus is a Perl module. Bioperl class for: CONSENSUS Identification of consensus patterns in unaligned DNA and protein sequences (Hertz, Stormo) References: G.Z. Hertz and G.D. Stormo. Identification of consensus patterns in unaligned DNA and protein... Platforms: *nix

Bio::Tools::Run::PiseApplication::charge is a Perl module. Bio::Tools::Run::PiseApplication::charge Bioperl class for: CHARGE Protein charge plot (EMBOSS) Parameters: (see also: http://bioweb.pasteur.fr/seqanal/interfaces/charge.html for available values): charge (String) init... Platforms: *nix

Syntax::Highlight::Perl is a Perl module that can highlight Perl Syntactical Structures. SYNOPSIS # simple procedural use Syntax::Highlight::Perl :BASIC; # or :FULL print format_string($my_string); # OO use Syntax::Highlight::Perl; my $formatter = new Syntax::Highlight::Perl; print... Platforms: *nix

ATA over Ethernet Tools are intended for use in conjunction with an ATA over Ethernet (AoE) driver for a Linux 2.6 kernel. They perform simple tasks like listing available devices, triggering device discovery, and restricting the network interfaces on which AoE is performed. Whats New in This... Platforms: *nix

The ICMP Hostname Tools for Linux include a responder daemon, a lookup tool, and a nameswitch module to handle ICMP host name functions. The NSS module caches all requests (including failures) and honors the TTL value sent by the responding host. It uses a configuration file called... Platforms: *nix

The mjpeg programs are a set of tools that can do recording of videos and playback, simple cut-and-paste editing and the MPEG compression of audio and video under Linux. Recording is supported for the Zoran based cards like the Buz (Iomega), DC10 (MIRO, Pinnacle), Matrox Marvel cards and the... Platforms: *nix

Cmos password recovery tools decrypts password stored in cmos used to access BIOS SETUP. Works with the following BIOSes: - ACER/IBM BIOS - AMI BIOS - AMI WinBIOS 2.5 - Award 4.5x/4.6x/6.0 - Compaq (1992) - Compaq (New version) - IBM (PS/2, Activa, Thinkpad) - Packard Bell - Phoenix... Platforms: *nix

Heirloom Development Tools package provides yacc, lex, m4, make, and SCCS as portable derivatives of the utilities released by Sun as part of OpenSolaris. The OpenSolaris utilities were in turn derived from the original Unix versions, and are assumed be conforming implementations of the POSIX... Platforms: *nix

Syntax::Highlight::Engine::Kate is a port to Perl of the syntax highlight engine of the Kate texteditor. Syntax::Highlight::Engine::Kate is a port to perl of the syntax highlight engine of the Kate text editor. The language xml files of kate have been rewritten to perl modules using a script.... Platforms: *nix

Syntax::Highlight::Engine::Kate::Java is a Perl plugin for Java syntax highlighting. SYNOPSIS require Syntax::Highlight::Engine::Kate::Java; my $sh = new Syntax::Highlight::Engine::Kate::Java([ ]); Syntax::Highlight::Engine::Kate::Java is a plugin module that provides syntax highlighting... Platforms: *nix

Syntax::Highlight::Engine::Kate::C is a plugin for C syntax highlighting. SYNOPSIS require Syntax::Highlight::Engine::Kate::C; my $sh = new Syntax::Highlight::Engine::Kate::C([ ]); Syntax::Highlight::Engine::Kate::C is a plugin module that provides syntax highlighting for C to the... Platforms: *nix

Bio::Tools::CodonTable is a bioperl codon table object. SYNOPSIS # This is a read-only class for all known codon tables. The IDs are # the ones used by nucleotide sequence databases. All common IUPAC # ambiguity codes for DNA, RNA and animo acids are recognized. # to use use... Platforms: *nix

lopster-tools is a set of tools for use with Lopster that allows users to view statistics for download and upload transfer, incomplete and finished files, how many MB are downloaded or uploaded, and the difference between down- and upload, amongst other features.. Get KLopsterUtils at... Platforms: *nix

The net-tools package contains a collection of programs that form the base set of the NET-3 networking distribution for the Linux operating system. It contains the important tools for controlling the network subsystem of the Linux kernel including arp, hostname, ifconfig, netstat, rarp and... Platforms: *nix

Bio::Tools::Run::PiseApplication::freak is a Perl module. Bio::Tools::Run::PiseApplication::freak Bioperl class for: FREAK Residue/base frequency table or plot (EMBOSS) Parameters: (see also: http://bioweb.pasteur.fr/seqanal/interfaces/freak.html for available values): freak... Platforms: *nix

Oasis XML Tools is a small utility to easily manage OpenOffice.org documents at xml level from outside OpenOffice.org suite. You can view and edit (with kwrite) the main xml files present in OpenOffice.org documents and update these documents with the changes. Also you can compare two or... Platforms: *nix

Mail::Digest::Tools is a Perl module that has tools for digest versions of mailing lists. SYNOPSIS use Mail::Digest::Tools qw( process_new_digests reprocess_ALL_digests reply_to_digest_message repair_message_order consolidate_threads_multiple consolidate_threads_single... Platforms: *nix

KMail Power Tools is meant to be a suite of enhancements to KMail and may be other mail user agents. It is currently composed of only one (perl) script that acts as a filter (take input from stdin, outputs the modified mail to stdout), adds dialog boxes to kmail, and allows the user to: -... Platforms: *nix

The Ionflux Tools Class Library is a lightweight multi-platform C++ framework designed for rapid development of applications in a client/server architecture. The Ionflux Tools Class Library is released under the GNU General Public License, meaning it is free software! (See LICENSE in the... Platforms: *nix