Gene Inspector

Disease Gene Profiler (DGP) comprises of a set of (bioinformatics) tools that can be used to identify the genes underlying susceptibility to common multifactorial diseases (such as diabetes, asthma and cancer) using freely available datasources. Platforms: Windows, Mac, Linux

Perl Entrez Gene Parser project provides Perl parsers for NCBI's Entrez Gene based on regular expression, Parse::RecDescent, Parse::Yapp and Perl-byacc. Some can parse human genome annotations in minutes. Documentation and user guides are provided. Platforms: Windows, Mac, Linux

The home of the Gene Ontology project on SourceForge, including ontology requests, software downloads, bug trackers, and much, much more. Platforms: Windows, Mac, Linux

Gene-Environment iNteraction Simulator 2 (GENS2) simulates interactions among two genetic and one environmental factor and also allows for epistatic interactions. GENS2 is based on data with realistic patterns of linkage disequilibrium, and imposes no limitations either on the number of... Platforms: Windows, Mac, Linux

A GUI inspector for GObject Introspection Repository .gir file. Platforms: Windows, Mac, Linux

GRaPe - a platform-independent software tool for building integrative gene-reaction-protein (GRP) networks. It generates the kinetic equations for each reaction and outputs a SBML document. It also implements two methods for parameter estimation. Platforms: Windows, Mac, Linux

LiveGMS is a PHP/MySQL driven gene editor for the game Creatures 3 / Docking Station. It provides a platform independent online editor with most features other binary genetics editors have. Platforms: Windows, Mac, Linux

UI Inspector for Eclipse is an Eclipse plugin that shows information for selected SWT controls, views/editors, perspectives, actions and associated data in the Eclipse IDE or RCP. Platforms: Windows, Mac, Linux

XML Inspector is an XML viewer. It allows you to navigate through XML files with the help of a tree view representing the file's structure and allows selecting an element in the document using the tree. It displays the contents of the XML file with syntax highlighting. Platforms: Mac

SQLite Inspector is an advanced management tool for SQLite databases. It allows reviewing and changing database schema (including removing columns), browsing and editing data, backing up databases, exporting individual tables and features a convenient syntax highlighter for editing SQL queries.... Platforms: Mac

Link Inspector is a simple yet powerful way to check your Rapidweaver web sites for anchor links that do not work (ie broken, wrong) using HTTP status codes. Platforms: Mac

The main purpose of Desktop Inspector is to detect whether, on the Desktop or in any other location, there are unknown invisible items, i.e. files or folders you created unwillingly or by accident, or were created by a third-party software. In fact y Platforms: Mac

Library Inspector is a simple tool for inspecting the contents of compiled object code, archives, dynamic libraries (dylib), frameworks and applications. There are two main components, the Library Inspector application, and the Library Inspector Quick Loo Platforms: Mac

a simple function that returns a colormap, C, for visualizing gene expression. C is just a N x 3 matrix [R G B] describing the range of color values.example usage: C = exp_colormap('blue-yellow',64); colormap(C);called without any arguments, it returns a [3 x 64] green-red colormap.options for... Platforms: Matlab

A research fellow at Harvard asked me to write a program to search for gene sequence, such as d-de?TCCd-deOao, and record the next 4 codes. The data file was 14Gb. He tried some matlab codes, and the system froze, or kept running and never stopped.I first tested using a loop method (V1.0). It... Platforms: Matlab

The script is a Matlab implementation of reference gene selection reported inJo Vandesompele et al, "Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes", Genome Biology 2002, 3 (7). Platforms: Matlab

Options Inspector is a tool with which you can list all the options in your database, view a certain one in detail, even its data is serialized, and alter exactly a certain part of option value. It is mainly designed for plugin developers and theme designers.When I am debugging a plugin, I always... Platforms: PHP

This application is an interactive simulation of gene expression that allows the user to: Explore a sample gene: Explore the correspondence between DNA, pre-mRNA, mature mRNA, and protein Map the functional elements of a gene. Create mutations in a gene and explore their effects. Design... Platforms: Mac

This is Gene Simmons Adiumy with his kiss custome and his signature Axe Bass, showing his tongue. Platforms: Mac

I wrote GPS Inspector as an experiment to learn more about GPS and how it could be used within JAVA. I figured others might find it useful or interesting so I have posted the source (GPLv3) and binaries here. It uses parts of other java libraries including: World Wind Java, Gpsylon, JFreeChart,... Platforms: Mac