Foregrounding Chains

BASILISK is a probabilistic model of the conformational space of amino acid side chains in proteins. Unlike rotamer libraries, BASILISK models the chi angles in continuous space, including the influence of the protein's backbone. Platforms: Mac, Linux

Kongreg8 is a church database system allowing you to free yourself from the chains of the office. Written in PHP and MySQL, it has been in production since 2008 and is now released under GNU GPL v3. Platforms: Windows, Mac, Linux

Molevolve is a Java library for running a Genetic Algorithm to model the 3-dimensional structures of peptide chains from amino-acid sequences. Client code can specify its own peptide chain model, fitness functions and GA operations. Requires JDK 1.5. Platforms: Windows, Mac, Linux

An utility to generate random names using high order Markov chains and several language rules which can be generated from scratch, from a word list or by randomly generating a new language from several user-defined parameters Platforms: Windows, Mac, Linux

Another block-dropping game, wherein players attempt to form and then destroy large chains of coloured blocks to score points (or humiliate other players). Platforms: Windows, Mac, BSD, Linux

Here is a small application that may help some developers who manage their files chains "localized" sour the form: "key" = "translated string"; From a CSV file generated from Excel or Numbers, the application will generate text files ready to use for each language present in the table.... Platforms: Mac

Genre: Puzzle & Trivia About Super Glinx Link matching pieces to form chains. Click on the last piece in the chain to remove the chain. You must remove all of the pieces to complete a level. - Play Full Screen (or in a window). - Six variations of timed or non-timed play. - More pieces and more... Platforms: Mac

This script returns the convex hull (separated into upper and lower chains of vertices) and the diameter (farthest pair of points), given input consisting of a list of 2d points represented as pairs (x,y). The convex hull algorithm is Graham's scan, using a coordinate-based sorted order rather... Platforms: Windows, Mac, *nix, Python, BSD Solaris

This program package helps modeling spin chains, qubit registers, etc. according to nonrelativistic quantum mechanics and some novel ideas from quantum information theory.In particular, it contains MATLAB routines for reordering qubits, for computing the reduced density matrix after removing some... Platforms: Matlab

This submission consists of simple and straight forward functions that plots robotic arm configurations and computes forward kinematics transformation matrices. The user has to simply specify the DH parameter matrix (the standard defined in craig's Introduction to Robotics book)The file contains... Platforms: Matlab

Two simple models are provided showing the characteristics of basic iterative algorithms for the inversion of kinematics, namely the Jacobian transpose, its pseudo-inverse and the damped least-squares (DLS). The pro's and con's can be compared interactively for a serial two-links and a... Platforms: Matlab

It's your job to take flight and knock out more than 100 doomsday devices that have been planted around the world. Travel to each destination on the map and eliminate chains of marbles by strategically matching colors in sets of three. Knock out cleverly-placed stationary marbles to block... Platforms: Mac

Free Sudoku helper written in Java HoDoKu is a Sudoku helper written in Java and available in English and German. HoDoKu generates sudokus in five different and fully configurable difficulty levels. Solve them yourself (with help from HoDoKu's hint system) or let HoDoKu do it for you. HoDoKu... Platforms: Mac

Dive into and explore an underwater country, and help Dorothy find out the truth about her family and save her daughter! Solve different kinds of puzzles and talk to sea creatures, who will guide you to the sea king! Create large chains of gems and collect artifacts in Charm Tale 2 * Mermaid... Platforms: Mac

Control bees to collect honey. Move flowers to Match 3 or more flowers in a line. The flowers will disappear and produce honey. When honey fills the bottle, the mission is completed. Use bombs to remove flowers more than three at one time. Every level has a different layout, different honey... Platforms: Mac

UWOBO is a Web-Service based XSLT processor. UWOBO interface is based on HTTP GET method: UWOBO can indeed be contacted with a proper URL containing all parameters needed to request stylesheet application. UWOBO supports not only the usual single XSLT stylesheet application to an XML document,... Platforms: *nix

Configures B-Trust security device, imports B-Trust certification chains and warns user that operation is unrecoverable, if he clicks delete certificate option for B-Trust certificate. Platforms: *nix

Flack Overstow allows you to create StackOverflow "spam" messages by using Markov chains to randomize recent posts by a given user. Uses StackApps API v0.8. Platforms: *nix

gAlan is an audio-processing tool (both on-line and off-line) for X windows and Win32. It allows you to build synthesisers, effects chains, mixers, sequencers, drum-machines etc. etc. in a modular fashion. Platforms: *nix

Gtk-IPTables is a GTK-based frontend for iptables written in C. You can create rules for all chains for Filter, NAT, and Mangle tables. Platforms: *nix