Enzyme Assays

bioGraph is a set of PHP scripts which can be used in enzyme assays. It currently, this includes pH, Temperature, Michaelis-Menten and Lineweaver-Burke plots. Platforms: Windows, Mac, *nix, PHP, BSD Solaris

bioGraph is a set of PHP scripts which can be used in enzyme assays. Currently, this includes pH, Temperature, Michaelis-Menten and Lineweaver-Burke plots. Platforms: Windows, Mac, Linux

Bio::Restriction::Enzyme is a single restriction endonuclease (cuts DNA at specific locations). SYNOPSIS # set up a single restriction enzyme. This contains lots of # information about the enzyme that is generally parsed from a # rebase file and can then be read back use... Platforms: *nix

Enzyme is an engine for storing structured data for structured searching.Under the umbrella of this simple idea, the Enzyme project consists of several subprojects. - The first is the original student profile management system which was developed at Catalyst Recruiting. This is a fully... Platforms: PHP

Enzyme is an engine for storing structured data for structured searching.Under the umbrella of this simple idea, the Enzyme project consists of several subprojects. - The first is the original student profile management system which was developed at Catalyst Recruiting. This is a fully... Platforms: Windows, Mac, *nix, PHP, BSD Solaris

As of January 2018, the Kintecus simulation software has been cited over 300 peer reviewed high impact factor journals: SCIENCE, JACS, PNAS, J. Phys. Chem.A, NATURE, PCCP, J. Biol. Chem., Plas. Chem. Plas. Proc., Int. J. Chem. It is an Industrial Strength/Research Grade chemical modeling,... Platforms: Windows, Windows 8, Windows 7, Windows Server

KineticsWizard is specially designed as an accessible and handy Java-based tool that was designed as a submission tool for extraction, analysis and submission of enzyme kinetics data. Now you can make use of this useful software to analyze your enzyme data in no time at all. Platforms: Windows

The DynaFit application was developed to perform nonlinear least-squares regression of chemical kinetic, enzyme kinetic, or ligand-receptor binding data. The experimental data can be either initial reaction velocities in dependence on the concentration of varied species (e.g., inhibitor... Platforms: Windows

MethMarker facilitates the design and optimization of gene-specific DNA methylation assays. Beyond its use as an epigenetic primer-design tool, it provides extensive support for epigenetic biomarker optimization. For a given gene or genomic region, MethMarker helps design DNA methylation assays... Platforms: Mac

Gene Construction KitO brings intuitive productivity to the molecular biology researcher's MAC, allowing effortless manipulation of DNA - either graphically or as sequence text. GCK eliminates tedious examination of sequence data by automatically identifying ORF's and silent mutations, and easily... Platforms: Mac

Molecular-based diagnostic assays are the gold standard for infectious diseases today, since they allow a rapid and sensitive identification and typing of various pathogens. While PCR can be designed to be specific for a certain pathogen, a subsequent sequence analysis is frequently required... Platforms: Windows

bint was written for the purpose of obtaining subsets of intensity data from genotyping assays. Either the X & Y intensities for creating cluster plots or Log R Ratio and B Allele Frequencies for CNV detection. Extracting the data for individual SNP/CNV markers or individual samples was slow... Platforms: Windows, Mac, BSD, Linux

A content management system for collecting, editing and searching profiles. We support student job-seeker profiles out-of-the-box, and ANY type of structured data (recipes, bug tracking, apartments, job postings, for sale, etc) with customization. Platforms: Windows, Mac, Linux

ICRPfinder finds or generates DNA patterns which can include restriction enzyme recognition sites in coding sequences without changing the translated protein sequence. Platforms: Windows, Mac, Linux

RAPD Primer Design from Metagenomes (RPD-M) scans metagenome sequences identifying and determining relative frequency of candidate primers for Random Amplification of Polymorphic DNA (RAPD) assays. Platforms: Mac, BSD, Linux

This program fits initial rate data for enzyme catalyzed reactions to the equation below using the method of Wilkinson, G.N. (1961) Biochem. J. 80, 324-332. v(obs)=Vm.So/(So+Km) Data can be inputted and fitted as initial rates. Fitt Platforms: Mac

ENZyme KINetics is the study of the chemical reactions that are catalysed by enzymes. In enzyme kinetics the reaction rate is measured and the effects of varying the conditions of the reaction investigated. Studying an enzyme's kinetics in this way can reveal the catalytic mechanism of this... Platforms: Matlab

ChemAP 2003 is a Periodic Table features 112 elements. It has more than 30 data items on each element, including abundance, melting and boilling points, electronegativity, more than 500 isotopes, history and more. The program includes utils to compare elements, calculate molecular weights,... Platforms: Windows

Bio::Map::MappableI is an object that can be placed in a map. SYNOPSIS # get a Bio::Map::MappableI somehow my $position = $element->map_position(); # these methods will be important for building sorted lists if( $position->equals($p2) ) { # do something } elsif( $position->less_tha($p2)... Platforms: *nix

Bio::Graphics::Feature is a simple feature object for use with Bio::Graphics::Panel. SYNOPSIS use Bio::Graphics::Feature; # create a simple feature with no internal structure $f = Bio::Graphics::Feature->new(-start => 1000, -stop => 2000, -type => transcript, -name => alpha-1... Platforms: *nix