Dna Alignment
AstroTortilla is a project for automating repeating astrophotography tasks, such as equatorial mount, polar alignment and target centering.
The application does that by integrating existing instruments and especially plate solving to the ASCOM telescope control interface.
Platforms: Windows, 2K, XP, Windows Vista, 7
License: Freeware | Download (441): AstroTortilla Download |
Offers tools to easily manage windows, including automatic alignment and sizing, pinning and unpinning (set on top), shortcuts to stack and view side by side and shortcuts to change size and position.
FEATURES:
· automatic window alignment and sizing
· pin and unpin windows
· stack all...
Platforms: Windows
License: Freeware | Download (420): FP-WindowManager Download |
ReverseComplement is a handy, easy to use, simple application specially designed to help you determine the reverse, complement, and reverse complement of DNA and RNA sequences.
Platforms: Windows
License: Freeware | Size: 686 KB | Download (47): ReverseComplement Download |
GENtle is a software for DNA and amino acid editing, database management, plasmid maps, restriction and ligation, alignments, sequencer data import, calculators, gel image display, PCR, and much more.
It is free software under GPLv2+.
Requested Features:
- Import of Vector NTI...
Platforms: Mac
License: Freeware | Size: 3.7 MB | Download (602): GENtle for Mac OS X Download |
GENtle is a software for DNA and amino acid editing, database management, plasmid maps, restriction and ligation, alignments, sequencer data import, calculators, gel image display, PCR, and much more.
It is free software under GPLv2+.
Requested Features:
- Import of Vector NTI...
Platforms: Linux
License: Freeware | Size: 1.7 MB | Download (531): GENtle for Linux Download |
GENtle is a software for DNA and amino acid editing, database management, plasmid maps, restriction and ligation, alignments, sequencer data import, calculators, gel image display, PCR, and much more.
It is free software under GPLv2+.
Requested Features:
- Import of Vector NTI...
Platforms: Windows
License: Freeware | Size: 2.7 MB | Download (512): GENtle for Windows Download |
Geneious Pro is an integrated, cross-platform bioinformatics software suite for manipulating, finding, sharing, and exploring biological data such as DNA sequences or proteins, phylogenies, 3D structure information, publications, etc. It features sequence alignment and phylogenetic analysis,...
Platforms: Windows, Mac, Linux
License: Shareware | Cost: $249.00 USD | Size: 30 MB | Download (490): Geneious PRO for Vista Download |
Bowtie, an ultrafast, memory-efficient short read aligner for short DNA sequences (reads) from next-gen sequencers. Please cite: Langmead B, et al. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 10:R25.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 14.85 MB | Download (48): Bowtie Download |
BSmapper - Sequence mapper for bisulfite sequencing reads for DNA methylation studies. Can handle Sanger and 454 reads for mapping to whole genomes or target regions.
Platforms: Mac
License: Freeware | Size: 10.24 KB | Download (62): BSmapper Download |
GATA is a graphic alignment tool for comparative sequence analysis. It makes use of BLAST to graphically align two DNA sequences, creating box- line- box representations of window scored local alignments. GATA also displays extensive GFF gene annotation.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 10.35 MB | Download (44): GATA Download |
Global optimal sequence alignment using the Needleman-Wunsch algorithm.
Aligns DNA, RNA, protein sequence and more!
See our sister project local alignment using Smith-Waterman:
http://sourceforge.net/projects/smithwaterman/
Platforms: Mac, BSD, Linux
License: Freeware | Size: 36.87 KB | Download (43): NeedlemanWunsch Download |
A fully developed set of DNA sequence assembly (Gap4 and Gap5), editing and analysis tools (Spin) for Unix, Linux, MacOSX and MS Windows.
Platforms: Mac
License: Freeware | Size: 4.11 MB | Download (67): Staden Package Download |
Explore the genetic building blocks of Ableton’s Live software in this deep, 22-video, molecular explanation of Live’s essential performance ingredients...
Just as real DNA is made up of genes, Live’s genetic materials are the collection of advanced
Platforms: Mac
License: Shareware | Cost: $19.99 USD | Size: 232 MB | Download (50): MPV's Live 8 205 - Live DNA! Download |
Features - Configurable alignment options - Support for Lightbox2 - My Imagepicker tab in My Account - Paging for the image browser - Additional configuration options on the settings page - Upload an image - Automatically generate thumbnails - Specify the size of both your thumbnail and resized...
Platforms: Windows, Mac, *nix, PHP, BSD Solaris
License: Freeware | Download (60): Image Picker Download |
This package includes a modified version of dnapars.exe from Phylip 3.6. The orignal dnapars,exe uses a menu for settings of parameters. I changed it into a command-line driven one, called mbetoolbox_dnapars.exe. Then I built a MATLAB interface for it. Within MATLAB, after setting the path, set...
Platforms: Matlab
License: Freeware | Size: 307.2 KB | Download (40): PHYLIP DNA parsimony (dnapars) GUI Download |
MOTIFINFO = GIBBSMOTIFSAMPLER(SEQARRAY,MOTIFVECTOR,ALPHABET,OPTIONS) Searches for the motifs in a set of sequences via Gibbs sampling. seqArray is a cell vector of sequence strings. motifVector is a vector of uniformly-spaced motif widths you wish to optimize. The program iterates over these...
Platforms: Matlab
License: Freeware | Size: 10 KB | Download (46): Gibbs Motif Sampler Download |
Explore the genetic building blocks of Ableton???*a*?s Live software in this deep, 22-video, molecular explanation of Live???*a*?s essential performance ingredients... Just as real DNA is made up of genes, Live???*a*?s genetic materials are the collection of advanced programming techniques that...
Platforms: Mac
License: Commercial | Cost: $19.99 USD | Size: 232 MB | Download (60): MPV's Live 8 205 - Live DNA! Download |
Cell DNA is designed for interactive performance of video, images, and sounds. The intuitive interface makes it ideal for mixing video, images, and sound in real-time. Use the knobs to adjust a number of real-time effects, or add in your own FreeFrame effects. A live camera input can also be...
Platforms: Mac
License: Shareware | Cost: $0.00 USD | Size: 72.42 MB | Download (39): Cell DNA Download |
SeaView is a multiplatform, graphical user interface for multiple sequence alignment and molecular phylogeny. SeaView reads and writes various file formats of DNA and protein sequences and of phylogenetic trees. SeaView drives programs muscle or clustalw for multiple sequence alignment, and...
Platforms: Mac
License: Shareware | Cost: $0.00 USD | Size: 3.71 MB | Download (45): SeaView fopr Mac Download |
MISFITS is a program to evaluate the goodness of fit of a model to an alignment in phylogeny reconstruction. It offers a look back at the alignment to pinpoint to site patterns that do not fit to the model and the resulting tree (thereafter referred to as the tree-model). MISFITS then introduces...
Platforms: Mac
License: Freeware | Size: 225.28 KB | Download (38): MISFITS Download |