Decomposition Reaction Types

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'Extended Data Types for PHP' is a collection of PHP5 classes, which provide easily usable common data types like Lists, Trees or Graphs. Installation will be possible via an PEAR Channel or as local library in a website's code base.

GRaPe - a platform-independent software tool for building integrative gene-reaction-protein (GRP) networks. It generates the kinetic equations for each reaction and outputs a SBML document. It also implements two methods for parameter estimation.


Platforms: Windows, Mac, Linux

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Platforms: Mac

A Better Finder Creators & Types is a file utility, which allows you to quickly and easily change file-to-application associations by setting the creator & type attributes of a single or multiple files. The Macintosh Finder uses these properties to associate documents to their applications. Many...


Platforms: Mac, Tiger Compatible

For this, you can create different types of relations, which can be added to related terms. It's based on the taxonomy's term_relation table.Related content can be displayed based on the relations between terms.InstallationUnpack in your modules folder (usually /sites/all/modules/) and enable...


Platforms: Windows, Mac, *nix, PHP, BSD Solaris

When a user attempts to register for your site, they will first be presented with a drop down selector of membership types which you as admin have previously defined. They will read instructions for proper membership type selection that you previously wrote. After selecting and submitting this...


Platforms: Windows, Mac, *nix, PHP, BSD Solaris

Matlab implementation of a monodomain reaction-diffusion model in 2-D. The model equations are a variant of the Fitzhugh-Nagumo equations modified to simulate the cardiac action potential. The progression of the two normalized state variables, membrane voltage (v) and recovery (r), is computed...


Platforms: Matlab

Chlorite-iodide-malonic acid (CIMA) reaction gives rise to temporal oscillations. Governing equations and reaction scheme can be found in: (1) I. R. Epstein and J. A. Pojman, An Introduction to Nonlinear Chemical Dynamics, Oscillations, Waves, Patterns, and Chaos, Oxford University Press, Oxford,...


Platforms: Matlab

This function plots the result of wavedec2 matlab function in two different modes. The first one called 'tree' displays all approximations and details coefficients (horizontal, vertical, diagonal), the second one called 'square' displays the classical "squared" representation of a wavelet image...


Platforms: Matlab

From undergraduate chemistry, we know how to test whether a reaction is 0th, 1st, or 2nd order by plotting different transformations of the data, and inspecting which plot fits the best.This program does the same thing. It transforms the data using different values of the order, attempting to...


Platforms: Matlab

Quadtree decomposition of RGB image of size M-by-N-by-3. Three thresholds for red,green and blue components are used. For any R or G or B block if the maximum value of the block elements minus the minimum value of the block elements is greater than its respective threshold then the RGB block is...


Platforms: Matlab

It generates a stochastic field on a squared space. Samples are created by Latin hypercube sampling and the spatial correlation is performed by an algorithm based on Cholesky decomposition. Example inside.


Platforms: Matlab

If you have a C function with arguments that are float or pointer to float (rather than double or pointer to double) you can call the function from MATLAB and pass arguments to the function as single data types. For example, in this case we have a C file that is a highpass filter. In MATLAB ver....


Platforms: Matlab

This function does the decomposition of a separable nD kernel intoits 1D components, such that a convolution with each of thesecomponents yields the same result as a convolution with the full nDkernel, at a drastic reduction in computational cost.SYNTAX:======= [K1,KN,ERR] =...


Platforms: Matlab

This program will obtain the LU decomposition for any square matrix. The LU decomposition method consists of finding the L and U matrices that will satisfy the equation A=L*U, A being a square matrix.Once L and U found, in order to solve for x, we can rewrite the equation A*x=B as L*x_star=b...


Platforms: Matlab

I created this class of zero-indexable arrays purely as a fun OOP exercise, in reaction to various Newsgroup threads inquiring about zero-indexable matrix types for MATLAB. Even though I've gone to the trouble to overload many methods for the class, I offer it as a toy, nothing more, and strongly...


Platforms: Matlab

Matrix decomposition using, e.g. the Cholesky decomposition requires the correlation matrix to be positive definite. That is, the eigenvalues must all be positive. In finance, this is rarely the case, and one often observes negative eigenvalues, or zero eigenvalues. These two functions do...


Platforms: Matlab

The program takes the intermediate stoichiometric matrix of a chemical reaction mechanism as the input and gives the intermediate nodes in terms of all the possible combinations of p-(q-1) reaction steps. This program is complimentary to the "Reaction Routes" program. Using both these programs a...


Platforms: Matlab

The main file in this package, rsparse.m, creates a sparse array object that is a subclass of MATLAB's native sparse data type, but which is robust against certain bugs and errors (present as of R2009b). S=rsparse(varargin) The I/O syntax and options for rsparse() are identical to that of...


Platforms: Matlab