Datasets

Matlab class to create and access HDF5 datasets transparently as Matlab variable. Data can be accessed and written with subscript referencing and assignment methods, just like matlab variables, only size must be explicitly changed, and brackets or conversion to double is needed if the full...

A collection of one or more related @datasets, achieving a sparse (and possibly normalized) representation of a larger @dataset Dataviews are compressed by providing a list of "key" variable names (analogous to key fields in a database) and a name for a new integer variable variable which will...

Spectr-O-Matic is an object-oriented toolbox for automating basic operations on spectroscopic datasets, such as: load, save and organize spectra, add, subtract, multiply, divide spectra, extract baseline, normalize, calculate derivative, find peaks (http://billauer.co.il/peakdet.html), plot...


Platforms: Matlab

Uses x,y coordinates to produce distance-based spatial weight matrices useful for spatial econometric regressions. The user is asked to input x and y coordinates, as well as a lower and upper bound threshold for the neighborhood.The code is adapted from a previous version by Shawn Bucholtz of the...


Platforms: Matlab

This function allows to use two different y-axes with the same data in one plot. Note, that only one curve but in two different units is shown. This is the difference to plotyy which plots two different datasets into one figure.Take a look to the screenshot and run the different examples in the...


Platforms: Matlab

MATLAB GUI for exploring 3D datasets through a sleek and simple interface (sample dataset included) ORTHOVIEW3D GUI for interactive viewing of 3D Volumes ORTHOVIEW3D is used to view orthographic slices of 3D volumes Type in an expression that generates a 3D array then press the Display button...


Platforms: Matlab

Performs rigid and non-rigid registration of point-sets using graph-based representations.Point-set registration methods using the EM algorithm and Softassign that exploits geometric and structural evidence.The code contains rigid and non-rigid registration algorithms.The parameters of the...


Platforms: Matlab

Extract specific Channels from BIOSEMI DATA FILE (BDF)Function reads in BDF data format and rewrites the specified channels to file. This has proven useful with very large datasets (e.g. high sampling frequencies) that must circumvent memory issues.


Platforms: Matlab

Semi Automatic brain masking for MRI volumes;Uses thresholding, erosion, dilation and overlap between slices for semi-automated masking of MRI brain datasets.


Platforms: Matlab

surface2vtk. Given the scattered data r and its co-ordinates x,y,z, surface2vtk interpolates the data to a regular grid and saves the resulting surface as a vtk file e.g. surface2vtk(x,y,z,r,'surface.vtk')For info about more complicated interpolation or translating different datasets to VTK...


Platforms: Matlab

x-y scatter plot with plot symbol size proportional to magnitude of z. Scale factor enables symbol size continuity when overplotting with subsequent datasets using a different color.


Platforms: Matlab

Provides linear and quadratic interpolation methods for functions defined on scattered 2D datasets.The quadratic method in tinterp seems to be superior when compared to the cubic method in gridata.Type "help tinterp" & "help tester"


Platforms: Matlab

The dataset can be used for testing purposes or to perform statistical analysis.Key Features of Sample Data Generator:- Generate sample customer data to populate a database for application testing purposes- Generate statistically random samples from a marketing database, for further analysis-...


Platforms: PHP

PHP tool to display graphs and stats based on temperature readings stored in MySQL from 1-wire or any source of data. Also supports alarms, mobile access, and logging data from digitemp. Works in any browser.Features of DTGraph - Digitemp/MySQL Graphing Tool:- Provides scripts to record...


Platforms: PHP

The Bioinformatic Software Bench for Drupal allows for a rapid and secure deployment of bioinformatic software. The BLAST, InterProScan, SSAHA2 and annot8r software are provided by default and plugins for new software can be readily written. An innovative graphical user interface guides both...


Platforms: PHP

Jgrial is a Free and Open Source Java Library to create OpenGL-Based charts using the jogl (Java OpenGL) library. Features: * OpenGL-Based Chart Library for Java * You don't need understand OpenGL * Suitable for very large datasets. * 2D charting is fully supported in current version *...


Platforms: Mac

A canvas that will draw an x,y line graph of one or multiple "datasets", you can modify almost every aspect of the resulting graph. Look at the included demo for an example. Not a replacement for excel :P but quite useful for simple graphs. Uses the XMLDictionary extension by Kevin Ballard to...


Platforms: Mac

pISTil (a Pipeline for Interaction Sequence Tag identification and analysis) is a collection of scripts, and programs - running on both Linux and MacOS X systems - for fast analysis of large yeast two-hybrid sequence datasets.


Platforms: Mac

AWclust is easy to use non-parametric population structure analysis software written for R with a GUI interface. Just point and click and you will be on your way to discovering the important cluster information in your SNP data sets. The software works well with both small and large SNP...


Platforms: Mac

jMOTU is a software package for clustering barcode DNA sequence data into molecular operational taxonomic units (MOTU). If you are not sure what a MOTU is, please see the DNA Barcoding pages on our website. jMOTU does the following: *reads input sequences in FASTA or NEXUS format *calculates...


Platforms: Mac