Clustal
MSA2SNP is a tool for mining SNP sites in multiple sequence alignment (MSA). This tool inherits the easy-to-use interface from MEGA4 Explorer with advance data presentation. MSA2SNP lets you visualize alignments and import from CLUSTAL program directly.
Platforms: Mac
License: Shareware | Cost: $0.00 USD | Size: 143.36 KB | Download (48): MSA2SNP Download |
Patristic is a Java program that uses as input different tree files and computes their patristic distances. Patristic allows saving and editing in different ways those distances. Patristic provides different graphic views of the results as well as the possibility to save them in the CSV format...
Platforms: Mac
License: Shareware | Cost: $0.00 USD | Size: 1.55 MB | Download (42): Patristic Download |
Geneious is a useful, unique and easy-to-use software system which has been designed to greatly speed up and simplify the research in molecular biology and biochemistry.
Geneious is a cross-platform research engine for the retrieval, organization and analysis of biomolecular data that allows...
Platforms: Windows
License: Freeware | Size: 39.6 MB | Download (468): Geneious Basic Download |
Geneious is a useful, unique and easy-to-use software system which has been designed to greatly speed up and simplify the research in molecular biology and biochemistry.
Geneious is a cross-platform research engine for the retrieval, organization and analysis of biomolecular data that allows...
Platforms: Windows
License: Freeware | Size: 39.6 MB | Download (504): Geneious Basic x64 Download |
DNAGalaxy is an attempt to produce an open-source bioinformatics software alternative to the expensive DNAStar Lasergene software. Its features currently include Blast and Entrez searching, a frontend to clustal and a sequence editor. It requires java1.5
Platforms: Windows, Mac, Linux
License: Freeware | Size: 3.23 MB | Download (47): DNA Galaxy Download |
IMAS is a Visual Analytics system for the discovery of knowledge in genomic information. IMAS enables genomic scientists to rapidly analyze and visualize a set of microbial genomic sequences using tools such as Glimmer, Blast, Clustal-W, Primer3.
Platforms: Windows, Mac
License: Freeware | Size: 4.79 MB | Download (50): IMAS - Genomic Analysis & Visualization Download |
MatrixGen is a Bioinformatics application used to generate scoring matrices from analysis of aligned Amino Acid and DNA data sets. These matrices can then be used by Clustal to generate more accurate alignments. Based upon the Henikoff BLOSUM method.
Platforms: Windows, Mac, BSD, Linux
License: Freeware | Size: 5.81 MB | Download (48): matrixGen Download |
The BioPHP Project is a non-profit, open source software project that aims to extend the PHP scripting language so it can be used to develop bioinformatics applications. BioPHP is NOT a bioinformatics application. Rather, it is a collection of tools to help PHP developers write bioinformatics...
Platforms: Windows, Mac, *nix, PHP, BSD Solaris
License: Freeware | Download (59): BioPHP Download |
UGENE is a free cross-platform genome analysis suite. It works perfectly on Windows, Mac OS or Linux and requires only a few clicks to install. Features: * Multiple sequence alignment using MUSCLE 3, KAlign, Clustal; * HMM profiles build and search, based on the source of HMMER 2 and HMMER...
Platforms: Mac
License: Shareware | Cost: $0.00 USD | Size: 30.7 MB | Download (35): Unipro UGENE Download |