Download Shareware and Freeware Software for Windows, Linux, Macintosh, PDA

line Home  |  About Us  |  Link To Us  |  FAQ  |  Contact

Serving Software Downloads in 976 Categories, Downloaded 29.982.343 Times

MassSpec::ViewSpectrum 0.05

  Date Added: April 25, 2010  |  Visits: 480


Report Broken Link
Printer Friendly Version

Product Homepage
Download (70 downloads)

MassSpec::ViewSpectrum is a Perl extension for viewing a mass spectrum. SYNOPSIS use MassSpec::ViewSpectrum; open PNG, ">mygraphic.png" or die "Unable to open output filen"; binmode PNG; my @masses = (1036.4,1133,1437,1480,1502); my @intensities = (0.1,0.15,0.05,0.10,0.2); my @annotations = (b,w,internal w, ,internal y); my $vs = MassSpec::ViewSpectrum->new(@masses,@intensities, @annotations); $vs->set(yaxismultiplier => 1.8); # a sample tweak to adjust the output my $output = $vs->plot(); print PNG $output; close PNG; MassSpec::ViewSpectrum - Perl extension for viewing a mass spectrum, e.g. typically obtained from the fragmentation of proteins or peptides. At present this is only implemented using GD graphics, but in principle this could be subclassed in the future to include alternative graphic paradigms such as SVG and Tk. The current implementation uses a mixture of GD::Graph and native GD, since GD::Graph 1.43 fails to draw the required vertical lines correctly. Negative peak intensity values are permitted; this permits the drawing of "pseudospectra" which, for example, illustrate peaks present in one spectrum but missing in another..

Requirements: No special requirements
Platforms: Linux
Keyword: Extension Gd Libraries Mass Massspec Massspecviewspectrum Output Perl Png Programming Viewing Viewspectrum
Users rating: 0/10

License: Freeware Size: 7.17 KB
Installer/Uninstaller Tools  -  Apache Toolbox 1.5.72
Apache Toolbox provides a means to easily compile Apache with SSL, PHP (v4 or v3), MySQL, APC (Alternative PHP Cache), mod_auth_nds, mod_dynvhost, WebDAV, mod_fastcgi, mod_gzip, mod_layout, mod_throttle, mod_accessref, mod_auth_sys, mod_bandwidth,...
92.16 KB  
Libraries  -  ExtUtils::ModuleMaker::PBP 0.09
ExtUtils::ModuleMaker::PBP is a Perl module to create a Perl extension in the style of Damian Conways Perl Best Practices. SYNOPSIS use ExtUtils::ModuleMaker::PBP; $mod = ExtUtils::ModuleMaker::PBP->new( NAME => Sample::Module );...
34.82 KB  
Libraries  -  XML::Generator::PerlData 0.89
XML::Generator::PerlData is a Perl extension for generating SAX2 events from nested Perl data structures. SYNOPSIS use XML::Generator::PerlData; use SomeSAX2HandlerOrFilter; ## Simple style ## # get a deeply nested Perl data structure......
13.31 KB  
Libraries  -  Cmenu 1.1
Cmenu is a Perl extension for menuing and data entry in perl scripts. SYNOPSIS use Cmenu; use Curses; use Text::Wrap; &menu_initialise($main_title,$advice); &menu_init($title,$sub-title,$topest,$menu_help);...
78.85 KB  
Libraries  -  Chilkat Class Libraries for Java 9.2.1
The full suite of Chilkat components & libraries are now available for the Java programming language. Commercially licensed components include: Email (POP3 / SMTP) IMAP Zip, GZip, and Unix Compress Encryption MIME and S/MIME FTP HTTP MHT...
Productivity  -  Spirit Calculator
Spirit calculator is a simple calculator built with Boost Spirit library. Spirit is a set of C++ libraries for parsing and output generation implemented as Domain Specific Embedded Languages (DSEL) using Expression templates and Template...
1024 KB  
Libraries  -  Tree::Simple::View::DHTML 0.16
Tree::Simple::View::DHTML is a Perl class for viewing Tree::Simple hierarchies in DHTML. SYNOPSIS use Tree::Simple::View::DHTML; ## a simple example # use the defaults (an unordered list with no CSS) my $tree_view =...
22.53 KB  
Libraries  -  Tree::Simple::View::HTML 0.16
Tree::Simple::View::HTML is a Perl class for viewing Tree::Simple hierarchies in HTML. SYNOPSIS use Tree::Simple::View::HTML; ## a simple example # use the defaults (an unordered list with no CSS) my $tree_view =...
22.53 KB  
Web Browser Tools  -  Professor X 0.4.1
Professor X is an extension which lets you see inside a pages head without viewing the sourcecode. Once installed the Professor X command is available by right-clicking as well as in the Tools menu. When applied to a page it will display the...
23.55 KB  
Programming  -  Extensible GNU Awk, with XML, PostgreSQL 1.0
An extension of GAWK, the GNU implementation of the AWK Programming Language, for processing XML data. XMLgawk is just one of the extensions that come with the xgawk distribution. The others are the PostgreSQL and the MPFR extension.
3.08 MB  
Programming  -  FLEX-db Digital Asset Manager 3.0.9
FLEX-db - an enterprise Digital Asset Manager (DAM). It ingests and links metadata with files, creates thumbnails, and processes files using business rules. FLEX-db has a JSP client, Java app server for file input and output and an EJB metadata...
21.57 MB  
Programming  -  Libicom 0.9.0
The libicom library is a character based dynamicly linked library for Linux. It is used to remotely control the Icom IC-R8500 wide band receiver via an RS232 link. All call and return parameters to the control functions are character string based....
20.48 KB  
Programming  -  dotdesktop 0.3
Dotdesktop library provides ability to parse desktop entry file and access the information in a convenient way. Desktop entry file format is defined by, it is used to describe information about an application such as the name and...
327.68 KB  
Programming  -  Cedalion for Linux 0.2.6
Cedalion is a programming language that allows its users to add new abstractions and define (and use) internal DSLs. Its innovation is in the fact that it uses projectional editing to allow the new abstractions to have no syntactic limitations.
471.04 KB  
Programming  -  libyasl 0.2
Libyasl is a C++ class library to easily realize TCP/UDP/Multicast clientsand servers in IPv4 and IPv6 environments under GNU/Linux systems.
143.36 KB  
Libraries  -  wolfSSL 3.12.0
The wolfSSL embedded SSL/TLS library is a lightweight SSL library written in ANSI standard C and targeted for embedded and RTOS environments - primarily because of its small size, speed, and feature set. It is commonly used in standard operating...
2.73 MB  
Libraries  -  EuGTK 4.8.9
Makes it easy to develop good- looking, fast, cross-platform programs that run on Linux, OS X, and Windows. Euphoria is a very fast interpreted/compiled language with straight-forward syntax. EuGTK allows programming in a clean, object-oriented...
10.68 MB  
Libraries  -  Linux User Group Library Manager 1.0
The LUG Library Manager is a project to help Linux User Groups start their own library. A LUG library is helpful to the community at large because it increases access to information, and gives everyone the opportunity to become more knowledgeable.
5.35 KB  
Libraries  -  Module::MakefilePL::Parse 0.12
Module::MakefilePL::Parse is a Perl module to parse required modules from Makefile.PL. SYNOPSIS use Module::MakefilePL::Parse; open $fh, Makefile.PL; $parser = Module::MakefilePL::Parse->new( join("", ) ); $info = $parser->required;...
8.19 KB  
Libraries  -  sqlpp 0.06
sqlpp Perl package is a SQL preprocessor. sqlpp is a conventional cpp-alike preprocessor taught to understand SQL ( PgSQL, in particular) syntax specificities. In addition to the standard #define/#ifdef/#else/#endif cohort, provides also...
10.24 KB