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segtools for Linux 1.1.2

Company: Orion Buske
Date Added: September 03, 2013  |  Visits: 198

segtools for Linux

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segtools is a Python library designed to put genomic segmentations back in the context of the genome! Using R for graphics, segtools provides a number of modules to analyze a segmentation in various ways and help you interpret its biological relevance.<br /><br />Segmentations should be in BED format, with the name field of each line used specifying the segment label of that line. The segtools modules allow you to compare the properties of the segment labels with one another.<br /><br />Don???*a*?t hesistate to contact the author for more information!<br /><br />Installation:<br /><br />The easy way to install segtools and its prerequisites, and set up your environment properly to use them is to use our interactive install script. Just type these two commands on your UNIX system:<br /><br />wget http://noble.gs.washington.edu/proj/segtools/install.py<br />python install.py<br /><br />#md5=75d22abb06c77d254ad2c26b74e50d12<br />#md5=1323b8f901ce097cd338a828e4a7d860

Requirements: No special requirements
Platforms: *nix, Linux
Keyword: Anotherdon Author Compare Contact Environm Hesistate Informationinstallationthe Install Installpy Interactive Labels Modules Properly Properties Script Segment Segtools
Users rating: 0/10

License: Freeware Size: 122.88 KB
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