TreeStat 1.2

Company: Andrew Rambaut

Date Added: November 28, 2013 | Visits: 409

Report Broken Link
Printer Friendly Version

Product Homepage
Download (48 downloads)

TreeStat is an application that can process a set of trees in a PHYLIP or NEXUS format tree file and calculate a number of summary statistics for each. These are saved in a tab-delimited file for analysis in Tracer or statistics packages. A range of summary statistics are included: * Tree-Balance Statistics. Colless's, B1, N_bar, cherry count. * Tree shape.Tree height, node heights, treeness, Pybus' gamma. * Population genetic. Fu & Li's D, external/internal ratio. * Other.Tree length, root-to-tip lengths.

Requirements: No special requirements

Platforms: Mac, Mac OSX

Keyword: Bar, Cherry, Colless, Count, Externalinternal, Gamma, Genetic, Height, Heights, Length, Lengths, Li039s, Othertree, Pybus, Ratio, Roottotip, Shapetree, Statistics, Summary, Treeness

Users rating: 0/10

License: Freeware

Size: 2.74 MB

USER REVIEWS

More Reviews or Write Review

TREESTAT RELATED

Development Tools - damped simle pendulum 1.0 after downloadingto run program, enter damping(r,R,h,l,m)m=mass of bobh=height to which bob is thrownl=damping factor(i.e gamma=(l/2m))r=length of pendulmr=radius of bobenter ur values...for programm..enjoy...	10 KB
Modules - Olimometer 1.43 A dynamic fundraising thermometer with PayPal integration, customisable height, currency, background colour, transparency and skins.The background of the thermometer image (the part with the text labels on) can be customised to fit in with your...	286.72 KB
Code Management Tools - Python library for PS3 0.1.2 Python library for PS3 (Sony Playstation 3) game development under Linux. Includes: rendering to the PS3 frame buffer on a per pixel basis or with blittable objects (solid, masked or alpha blended), support for PS3 controllers and integration with...	43.01 KB
Mathematics - mMass for Mac OS 3.8 Presents open source cross-platform package of tools for precise mass spectrometric data analysis and interpretation. It is written in Python language and released under GNU General Public License, so its portable to different computer platforms...	31 MB
Modules - TweetMeme Button 2.3 The TweetMeme Retweet button is the defacto standard in retweeting - used by some of the biggest websites in the world including Techcrunch.com, PerezHilton.com, Break.com, CNET.com, Wired, Time Magazine and hundreds of other massive brands, in...	61.44 KB
Finance - OLAP Statistics for SharePoint 2.2 OLAP Statistics & Reporting for SharePoint enables you to connect to a SharePoint list, task or calendar and explore data in a multi-dimensional grid, pivot tables, filters, and graph or chart view. You can run this OLAP analysis tool on on each...	5.65 MB
Modules - Advanced Excerpt 0.1.2 In addition to keeping HTML markup in the excerpt, the plugin also corrects HTML that might have been broken due to the trimming process.InstallationUnpack and upload it to the /wp-content/plugins/ directory.Activate the plugin through the...
Networking - BuddyPress Admin Bar Mods 1.0.1 Buddypress Admin Bar is great, but often difficult to modify. The objective is to allow the wordpress website admin an easy solution to changing the look and feel of the BuddyPress Admin Bar. Also allowing access to add and remove the menus shown...	10 KB
Development Tools - Global maximum point for 3D surface using GA 1.0 This program demonstrates the optimization by genetic algorithm to find the global maximum height for thee dimensional multiple peak surface. The GA operates by real coding method with elitism	10 KB
Web Authoring - Status Bar Javascript Magic 1.0.100 Status Bar Javascript Magic (SBJM) is a software specially designed for the web developer that wants to animate the Status bar of their web pages, in the easiest possible manner, without the need to write or edit a single line of code! There...	807 KB

NEW DOWNLOADS IN MACINTOSH SOFTWARE, EDUCATION

Macintosh Software - EasyEDA PCB Designer for MacOS 2.0.0 EasyEDA, a great web based EDA(Electronics Design Automation) tool, online PCB tool, online PCB software for electronics engineers, educators, students, makers and enthusiasts. Theres no need to install any software. Just open EasyEDA in any...	34.4 MB
Macintosh Software - VideoSolo Video to GIF Converter (Mac) 1.0.12 How to make a GIF? VideoSolo Free Video to GIF Converter for Mac supports all popular video files including MP4, AVI, MOV, WMV, FLV, M4V, etc. You can easily turn MP4/AVI/MOV/WMV/FLV/M4V to GIF animation on Mac and share your GIFs with your...	46.51 MB
Macintosh Software - VideoSolo Free Video Converter (Mac) 1.0.18 VideoSolo Free Video Converter for Mac is a fast, powerful and easy-to-master video converter. Its main purpose is to convert video files from one format into another. It is able to convert video and audio files in 300+ formats on Mac for totally...	75.29 MB
Macintosh Software - ManyCam for Mac 6 ManyCam is a free Webcam software and a screen recorder for anyone to use. Several feature enhancements are included within ManyCam to produce a professional quality live video production. It can connect a desktop, smartphone, tablet and live...	90.49 MB
Macintosh Software - MacX Free Rip DVD to QuickTime for Mac 4.1.9 MacX Free Rip DVD to QuickTime for Mac is totally free yet versatile DVD to QuickTime ripper software for Mac users to free rip both normal and copy-protected DVDs to QuickTime MOV, MP4 on Mac with excellent image quality. Besides the powerful...	36.3 MB
Education - Sliding Down an Incline Plane Model 1.0 This interactive simulation shows a stone block lying at rest on an inclined plane. Initially, the component of gravity along the plane surface is exceeded by the force of static friction. The slope of the ramp can be increased or decreased,...	51.2 KB
Education - MrAIC 1.4.4 MrAIC.pl is a Perl script for calculating AIC, AICc, BIC, and Akaike weights (for a review, see Burnham and Anderson, 2002) for nucleotide substitution models. Likelihood scores under different models are estimated using PHYML (Guindon and...	10.24 KB
Education - Three Charges 1.0 In this simulation, you can investigate the idea of the force between charged objects. Initially, the simulation sets up three charged objects, one at each corner of an equilateral triangle. The charges have different magnitudes - your job is to...	1.36 MB
Education - AWclust 3.0 AWclust is easy to use non-parametric population structure analysis software written for R with a GUI interface. Just point and click and you will be on your way to discovering the important cluster information in your SNP data sets.	20.48 KB
Education - BEAGLE/BEAGLECALL Scripts Package 1.0 These scripts are for importing and exporting files from the BEAGLE and BEAGLECALL Genetic Analysis Software Packages	317.44 KB

Windows Software	BeOS Software
Macintosh Software	Linux Software
PDA Software	OS/2 Software
Mobile Software	Scripts