GTOM - Generalized Topological Overlaping Measure 1.0

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COMPUTEGTOM computes the generalized overlaping measure algorithm (GTOM) [1]AuthorsJoaquin GodoT-i &IdoT-igo Martincorena University of Navarra -Dpt. of Physics and Applied Mathematics &Centre for Applied Medical Research. Pamplona (Spain). November 22nd, 2007batchComputeGTOM.m contains an example that loads and adjacency matrix and computes the GTOM matrix. Finally, a hierarchical clustering of GTOM matrix is carried out.Type 'help computeGTOM' for further information and examples.References GTOM [1] Yip A, Horvath S (2007) Gene network interconnectedness and the generalized topological overlap measure BMC Bioinformatics 2007, 8:22 TOM [2] Ravasz E. et al. (2002) Hierarchical Organization of Modularity in Metabolic Networks Science 297 (5586), 1551.

Requirements: No special requirements

Platforms: Matlab

Keyword: 039help, Adjacency, Carried, Computegtom, Examples, Finally, Information, Matrix, References

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License: Shareware

Size: 10 KB

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