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plotphytree 1.0

  Date Added: July 27, 2013  |  Visits: 234

plotphytree

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PLOTPHYTREE(TREE) renders a phylogenetic tree object into a MATLAB figure as aphylogram with equal angle algorithm.plotphytree(...,'ROTATION',value) will orient the phylogenetic tree within the figure window. Positive angles cause counterclockwise rotation, otherwise clockwise rotation.plotphytree(...,'FONTSIZE',value) will set the lable font size.A value specifying the font size to use for text in units determined by the FontUnits property (1 point = 1/72 inch). The default is calculated from the dataaccording to the number of nodes.plotphytree(...,'LINESTYLE',value) will set the color of the tree. The default color is blue.plotphytree(...,'FONTCOLOR',value) will set the color of lable. It is a vector includes [R, G, B] components. Each with the range of 0 to 1. The default setting is [.2 .2 .2]. Example:tr = phytreeread('pf00002.tree'); plotphytree(tr,'ROTATION',-pi/2, 'FONTSIZE', 8, 'LINESTYLE', 'b', 'FONTCOLOR', [0.2 0.2 0.2]);This program refered the plot function in Bioinformatics Toolbox of Matlab and phylip program.

Requirements: No special requirements
Platforms: Matlab
Keyword: Bioinformatics Blueplotphytree Fontcolor Calculated Color Components Dataaccording Default Exampletr Function Includes Matlab Nodesplotphytree Linestyle Number Phylip Phytreeread Tree Plotphytreetr Rotation Range Setting Toolbox Vector
Users rating: 0/10

License: Freeware Size: 10 KB
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