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Gene Ontology 1.0

Company: geneontology.org
Date Added: December 19, 2012  |  Visits: 338

Gene Ontology

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The home of the Gene Ontology project on SourceForge, including ontology requests, software downloads, bug trackers, and much, much more.

Requirements: No special requirements
Release Date: December 19, 2012
Platforms: Windows, Mac, Linux
Users rating: 0/10

License: Freeware Size: 44.5 MB
GENE ONTOLOGY RELATED
Science  -  BioAGENDA beta.08.04.2012
AGENDA (Application for mining Gene Ontology Data)
59.32 KB  
Education  -  ErmineJ 2.1.21
ErmineJ performs analyses of gene sets in expression microarray data or other genome-wide data that results in rankings of genes. A typical goal is to determine whether particular biological pathways are "doing something interesting" in the data....
21.13 MB  
Multimedia & Graphics  -  FastSemSim 0.4.5 Beta
FastSemSim is specially designed as a handy Python-based efficient implementation of a couple of semantic similarity measures. The main target of the project is to enable fast and easy calculation of similarity between proteins and genes using...
 
Libraries  -  GO::View 0.72
GO::View is a Perl module that creates a gif or png image for visualizing the GO DAG. This perl module generates a graphic that displays the parent and child relationships of a selected GO term. It also provides the visualization for the...
870.4 KB  
Multimedia & Graphics  -  MEFIT 1.2
MEFIT, also known as the Microarray Experiment Functional Integration Technology is developed as a system for microarray integration. Given any amount of microarray data, it predicts the probability of pairwise functional relationship for any...
 
Science  -  Osprey Network Visualization System 1.0
Osprey is a software platform for visualization of complex interaction networks. Osprey builds data-rich graphical represetations from Gene Ontology (GO) annotated interactions maintained by the BioGRID.
8.32 MB  
Business  -  Blast2GO 0.5.0
Blast2GO?*A* is an ALL in ONE tool for functional annotation of (novel) sequences and the analysis of annotation data. Main Application Features are: Easy start up and low maintenance. Make sure you have JAVA, download...
4.1 KB  
Education  -  EcoCyc 2.1.1
EcoCyc is an electronic reference source for E. coli biologists and biologists who work with related microorganisms. EcoCyc Mobile provides a streamlined mobile interaction for EcoCyc, a bioinformatics database that describes the genome and...
2.4 MB  
Libraries  -  Bio::Ontology::Relationship 1.4
Bio::Ontology::Relationship is a relationship for an ontology. SYNOPSIS $rel = Bio::Ontology::Relationship->new( -identifier => "16847", -subject_term => $subj, -object_term => $obj, -predicate_term => $pred ); This is a basic...
4.7 MB  
Libraries  -  Bio::Ontology::GOterm 1.4
Bio::Ontology::GOterm is a representation of GO terms. SYNOPSIS $term = Bio::Ontology::GOterm->new ( -go_id => "GO:0016847", -name => "1-aminocyclopropane-1-carboxylate synthase", -definition => "Catalysis of ...", -is_obsolete => 0,...
4.7 MB  
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This interactive simulation shows a stone block lying at rest on an inclined plane. Initially, the component of gravity along the plane surface is exceeded by the force of static friction. The slope of the ramp can be increased or decreased,...
51.2 KB  
Education  -  MrAIC 1.4.4
MrAIC.pl is a Perl script for calculating AIC, AICc, BIC, and Akaike weights (for a review, see Burnham and Anderson, 2002) for nucleotide substitution models. Likelihood scores under different models are estimated using PHYML (Guindon and...
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Complex diseases involve multiple genes with low penetration which may be distributed over the genome. Most of the current haplotype association methods are typically restricted in length and consist of alleles from contiguous SNPs. These...
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Education  -  AWclust 3.0
AWclust is easy to use non-parametric population structure analysis software written for R with a GUI interface. Just point and click and you will be on your way to discovering the important cluster information in your SNP data sets.
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Science  -  Multiple beam interference 1.0
This applet shows multiple beam interferences from a parallel dielectric thin film. The applet lets you study the evolution of reflection and refraction factors when the index of refraction and the absorption of the film and the substrate are...
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Science  -  Point Charge Forces in 2D Model 1.0
The Point Charge Forces in Two-Dimensions model investigates the electric force that a charged particle experiences in a two-dimensional situation, because of four other nearby charged particles. The net electric force is shown as an arrow...
1.36 MB  
Science  -  Lennard-Jones PVT System Model 1.0
The Lennard-Jones PVT System simulates a two-dimensional system of particles confined between a thermal reservoir and a piston. This computer model is designed to study the equation of state for particles interacting via a simple but realistic...
962.56 KB  
Science  -  Ideal Fermi Gas Integral 1.0
The STP IdealFermiGasIntegral program numerically determines the value of the chemical potential of an ideal Fermi gas for a given temperature and density. STP IdealFermiGasIntegral is part of a suite of Open Source Physics programs...
476.16 KB  
Science  -  JiveX DICOM Viewer 4.4
The DICOM Viewer is available as a free Personal Edition for non-commercial usage. This version is limited in its functionality and can only be used for a limited period of time. Note: This version expires on 2012-01-01. Before...
25.55 MB