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ncRNA Mapper 1.0

Company: Youri Hoogstrate
Date Added: June 24, 2012  |  Visits: 428

ncRNA Mapper

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ncRNA Mapper is a computer program that gives more insight in the localization of sequencing fragments.

Given that sequencing of RNA gives reads at fixed base-positions, ncRNA Mapper analyzes the alignments (generated by Short Sequence Location Mapper; SSLM) by: visualizing them, retrieving the conservation of each given nucleotide, predicting the folding (done by centroid_fold), calculating how conserved the fragment is relative to the whole RNA sequence

The input that is required to accomplish these methods is SSLM-data, the RNA file where SSLM is based on, and an internet connection to download the conservation tracks.

Get ncRNA Mapper and try it for yourself to fully assess its capabilities!

Requirements: No special requirements
Release Date: June 24, 2012
Platforms: Windows All
Keyword: Alignment Visualization Analyzer Fasta Fasta Analysis Ncrna Mapper Rna Sequence Rna Sequence Mapper
Users rating: 0/10

License: Freeware
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