Restriction Enzyme Digest

Bio::Restriction::Enzyme is a single restriction endonuclease (cuts DNA at specific locations). SYNOPSIS # set up a single restriction enzyme. This contains lots of # information about the enzyme that is generally parsed from a # rebase file and can then be read back use...

ICRPfinder finds or generates DNA patterns which can include restriction enzyme recognition sites in coding sequences without changing the translated protein sequence.

Bio::Map::MappableI is an object that can be placed in a map. SYNOPSIS # get a Bio::Map::MappableI somehow my $position = $element->map_position(); # these methods will be important for building sorted lists if( $position->equals($p2) ) { # do something } elsif( $position->less_tha($p2)...


Platforms: *nix

Bio::MCPrimers is a Perl module to create molecular cloning PCR primer pairs for a given gene so that the gene can be directionally inserted into a vector. Solver is generic, restriction enzymes and their order in the vector are specified in the caller. XPORT SUBROUTINES sub find_mc_primers...


Platforms: *nix

Template::Plugin::Digest::MD5 is a TT2 interface to the MD5 Algorithm. SYNOPSIS [% USE Digest.MD5 -%] [% checksum = content FILTER md5 -%] [% checksum = content FILTER md5_hex -%] [% checksum = content FILTER md5_base64 -%] [% checksum = content.md5 -%] [% checksum = content.md5_hex -%]...


Platforms: *nix

Template::Plugin::Digest::SHA1 is a TT2 interface to the SHA1 Algorithm. SYNOPSIS [% USE Digest.SHA1 -%] [% checksum = content FILTER sha1 -%] [% checksum = content FILTER sha1_hex -%] [% checksum = content FILTER sha1_base64 -%] [% checksum = content.sha1 -%] [% checksum =...


Platforms: *nix

Digest::Perl::MD4 is a Perl implementation of Ron Rivests MD4 Algorithm. This is not C-code interface (like Digest::MD5) but a Perl-only implementation of MD4 (like Digest::Perl::MD5). Because of this, it is slow but avoids platform specific complications. For efficiency you should use...


Platforms: *nix

Digest::MD5::Perl is a Perl implementation of Ron Rivests MD5 Algorithm. This is not an interface (like Digest::MD5) but a Perl implementation of MD5. It is written in perl only and because of this it is slow but it works without C-Code. You should use Digest::MD5 instead of this module if it...


Platforms: *nix

File::RsyncP::Digest is a Perl interface to rsync message digest algorithms. SYNOPSIS use File::RsyncP::Digest; $rsDigest = new File::RsyncP::Digest; # specify rsync protocol version (default is <= 26 -> buggy digests). $rsDigest->protocol(version); # file MD4 digests...


Platforms: *nix

Mail::Digest::Tools is a Perl module that has tools for digest versions of mailing lists. SYNOPSIS use Mail::Digest::Tools qw( process_new_digests reprocess_ALL_digests reply_to_digest_message repair_message_order consolidate_threads_multiple consolidate_threads_single...


Platforms: *nix

Digest::SHA::PurePerl is a Perl implementation of SHA-1/224/256/384/512. SYNOPSIS In programs: # Functional interface use Digest::SHA::PurePerl qw(sha1 sha1_hex sha1_base64 ...); $digest = sha1($data); $digest = sha1_hex($data); $digest = sha1_base64($data); $digest = sha256($data);...


Platforms: *nix

WebCache::Digest is a Cache Digest implementation in Perl. SYNOPSIS use WebCache::Digest; # fetching a digest via HTTP $d = new WebCache::Digest; $d->fetch("flibbertigibbet.swedish-chef.org", 3128); # dump header fields out for info print STDERR $d->dump_header(); # saving a digest...


Platforms: *nix

Digest::SHA1 is a Perl interface to the SHA-1 algorithm. SYNOPSIS # Functional style use Digest::SHA1 qw(sha1 sha1_hex sha1_base64); $digest = sha1($data); $digest = sha1_hex($data); $digest = sha1_base64($data); $digest = sha1_transform($data); # OO style use Digest::SHA1; $sha1...


Platforms: *nix

Digest::MD5::Reverse provides MD5 Reverse Lookup. MD5 sums (see RFC 1321 - The MD5 Message-Digest Algorithm) are used as a one-way hash of data. Due to the nature of the formula used, it is impossible to reverse it. This module provides functions to search several online MD5 hashes database...


Platforms: *nix

The emails contain a simple listing of links, grouped by node type, to nodes posted on the site since the last time a digest newsletter was sent out. The module is an add-on for the Simplenews module.InstallationUnpack in your modules folder (usually /sites/all/modules/) and enable under...


Platforms: Windows, Mac, *nix, PHP, BSD Solaris

The emails contain a simple listing of links, grouped by node type, to nodes posted on the site since the last time a digest newsletter was sent out. The module is an add-on for the Simplenews module.InstallationUnpack in your modules folder (usually /sites/all/modules/) and enable under...


Platforms: Windows, Mac, *nix, PHP, BSD Solaris

Enzyme is an engine for storing structured data for structured searching.Under the umbrella of this simple idea, the Enzyme project consists of several subprojects. - The first is the original student profile management system which was developed at Catalyst Recruiting. This is a fully...


Platforms: PHP

RSS Digest fetches items from the RSS or Atom feed that you specify and posts them to your blog in a daily or weekly digest.A common use is to create a daily digest of items you've posted to social networking sites such as Delicious, Twitter, Facebook, etc.Unlike the other couple of Wordpress...


Platforms: PHP

Message Digest is a Java based cross platform hash generation tool.


Platforms: Mac

HTTP Digest requires the server to be able to calculate a hash over the user's username, password, and your realm. Since django.contrib.auth only stores a hash of the user's password, this cannot be used to authenticate HTTP Digest sessions. django-digest intercepts password assignments and user...


Platforms: *nix