Pubmed Entrez
Geneious is a useful, unique and easy-to-use software system which has been designed to greatly speed up and simplify the research in molecular biology and biochemistry.
Geneious is a cross-platform research engine for the retrieval, organization and analysis of biomolecular data that allows...
Platforms: Windows
License: Freeware | Size: 39.6 MB | Download (504): Geneious Basic x64 Download |
Geneious is a useful, unique and easy-to-use software system which has been designed to greatly speed up and simplify the research in molecular biology and biochemistry.
Geneious is a cross-platform research engine for the retrieval, organization and analysis of biomolecular data that allows...
Platforms: Windows
License: Freeware | Size: 39.6 MB | Download (468): Geneious Basic Download |
The CL!Psci Scientific Search Engine is a superfast and efficient, free Google-like software, designed to meet the specialized and intensive, web-based information need of the researcher scientist. * Customize a menu of your most commonly used scientific search engines * Right-click on a word or...
Platforms: Windows
License: Freeware | Size: 1.53 MB | Download (446): Cl!psci Download |
PubMedMaker is a bibliographic application for those in the fields of medicine and biology. It will convert PubMed data to FileMaker Pro files simply by dragging and dropping. PubMed is a free on-line web site for MEDLINE offered by National Library of Medicine. PubMedMaker also makes Reference...
Platforms: Mac
License: Freeware | Download (111): PubMedMaker 7 Download |
Reference Miner searches the Internet to find and display reference information: PubMed, Amazon (Amazon US, Amazon UK, Amazon Germany, Amazon Japan), and the Library of Congress. Special features include the display of book cover art (Amazon) and the ability to easily perform complex searches.The...
Platforms: Mac
License: Freeware | Download (111): Reference Miner Download |
WIKINDX is a free bibliographic and quotations/notes management and article authoring system designed either for single use (on a variety of operating sytems) or multi-user collaborative use across the internet. Features:User: - 37 resource types. - Multi-user mode - create and manage your own...
Platforms: Windows, Mac, *nix, PHP, BSD Solaris
License: Freeware | Download (110): WIKINDX Download |
PubMedMaker is bibliography software, similar in principle to EndNote, Pro-Cite and Reference Manager. This shareware program is designed for anyone who wishes to manage medical literature data with FileMaker Pro database. We aim at easy to use and intuitional operation for managing MEDLINE data....
Platforms: Mac
License: Freeware | Download (109): PubMedMaker Download |
Peptide::Pubmed is a Perl module that can extract peptide sequences from MEDLINE article abstracts. SYNOPSIS use Peptide::Pubmed; $parser = Peptide::Pubmed->new; $in = { PMID => q[15527327], Author => q[Doe JJ, Smith Q], Journal => q[J Biological Foo. 2004;8(2):123-30.], Title => q[Foo,...
Platforms: *nix
License: Freeware | Size: 358.4 KB | Download (104): Peptide::Pubmed Download |
The Entrez Widget provides a quick access to the NCBI Databases. You just have to enter your search terms and the result will be displayed in a new browser window.
Platforms: Mac
License: Freeware | Download (104): Entrez Widget Download |
RefSense is the name of both a web interface to PubMed, and a set of command line tools for accessing PubMed. RefSense was previously distributed as Biblio. The web interface provides easy access to PubMeds data as well as some useful tools not found at the actual PubMed site. The command...
Platforms: *nix
License: Freeware | Size: 30.72 KB | Download (91): RefSense Download |
Geneious Basic is your personalized library of genomic and genetic data; that provides a fully integrated, visually advanced toolset for:Sequence alignment and phylogeneticsSequence analysisBLAST, Protein structure viewing, NCBI, EMBL, Pubmed auto-find & moreAPI for creating your own plugins...
Platforms: Mac
License: Freeware | Download (91): Geneious Download |
Phplabware project is a web-driven database management system. Phplabware runs on a server and is accessed through a web browser. Databases can be designed within a web-interface. Data-entry takes place in forms, which can be altered using phplabwares plugin mechanism. Search results can be...
Platforms: *nix
License: Freeware | Size: 645.12 KB | Download (86): PhpLabware Download |
BioMail is a small web-based application for medical researchers, biologists, and anyone who wants to know the latest information about a disease or a biological phenomenon. It is written to automate searching for recent scientific papers in the PubMed Medline database.Periodically BioMail does a...
Platforms: *nix, Perl, BSD
License: Freeware | Download (71): BioMail Download |
This program is a parser that abstract a data structure from a given Entrez Gene record, and users of the parser can decide what to do/extract from the data structure. Perl Entrez Gene Parser project provides Perl parsers for NCBI's Entrez Gene based on regular expression, Parse::RecDescent,...
Platforms: Windows, Mac, *nix, Perl, BSD Solaris
License: Freeware | Download (65): Perl Entrez Gene Parser Download |
An automatically-updating library of genomic and genetic data; that provides a fully integrated, visually-advanced toolset for
- Sequence alignment and phylogenetics
- Sequence analysis, Contig assembly,
- primers, restriction analysis
- BLAST. Protein structure viewing, NCBI, UniProt, Pubmed...
Platforms: Mac
License: Freeware | Size: 77 MB | Download (58): Geneious for Mac OS Download |
OnCite is the University College London's online publications database, implemented in MySQL and PHP. For an indication of scale: UCL's database contains (at the time of writing) over 74,000 publications records, 3,700 users, 120 departments, and over a hundred administrators. Features -...
Platforms: Windows, Mac, *nix, PHP, BSD Solaris
License: Freeware | Download (58): OnCite Download |
JabRef is an open source bibliography reference manager. The native file format used by JabRef is BibTeX, the standard LaTeX bibliography format. JabRef runs on the Java VM (version 1.5 or newer), and should work equally well on Windows, Linux and Mac OS X. Bibliographies generated by LaTeX and...
Platforms: Windows, Mac, *nix, Java, BSD Solaris
License: Freeware | Download (57): JabRef 2.4b Download |
MyPHPBib is a web application for managing bibliographic references. It can import references in several formats (e.g., EndNote and RIS), as well as importing references directly from PubMed. MyPHPBib is written in PHP and uses MySQL as the database. MyPHPBib requires MySQL, PHP, Perl 5, and...
Platforms: Windows, Mac, *nix, PHP, BSD Solaris
License: Freeware | Download (53): MyPHPBib Download |
JabRef is an open source bibliography reference manager. The native file format used by JabRef is BibTeX, the standard LaTeX bibliography format. JabRef runs on the Java VM (version 1.5 or newer), and should work equally well on Windows, Linux and Mac OS X.
Features
Advanced BibTeX editor...
Platforms: Mac
License: Freeware | Size: 6.7 MB | Download (52): JabRef for Mac OS X Download |
MGWT: Identification of protein coding regions using the ModifiedGabor-wavelet transform.Sequence of test:F56F11.4.fasta (included into the zip file)http://www.ncbi.nlm.nih.gov/entrez/viewer....de&val=AF099922http://www.vision.ime.usp.br/~jmena/projec...ome_results/F5/References:[1] J. P....
Platforms: Matlab
License: Freeware | Size: 51.2 KB | Download (49): MGWT Download |