Protein Hydrolysis

Bio::Tools::Run::PiseApplication::consensus is a Perl module. Bioperl class for: CONSENSUS Identification of consensus patterns in unaligned DNA and protein sequences (Hertz, Stormo) References: G.Z. Hertz and G.D. Stormo. Identification of consensus patterns in unaligned DNA and protein...

Bio::Tools::Run::PiseApplication::charge is a Perl module. Bio::Tools::Run::PiseApplication::charge Bioperl class for: CHARGE Protein charge plot (EMBOSS) Parameters: (see also: http://bioweb.pasteur.fr/seqanal/interfaces/charge.html for available values): charge (String) init...

Aero AIO: Folding@Home is a plugin for Aero AIO to monitor your Folding@Home client. It comes with a simple configuration dialog to set the update interval and client path. It was inspired by navyrains folding-karamba theme. Folding@Home is a distributed computing project to understand...


Platforms: *nix

Bio::Tools::CodonTable is a bioperl codon table object. SYNOPSIS # This is a read-only class for all known codon tables. The IDs are # the ones used by nucleotide sequence databases. All common IUPAC # ambiguity codes for DNA, RNA and animo acids are recognized. # to use use...


Platforms: *nix

MassCalculator is a Perl module that implements common mass computations in mass spectrometry. SYNOPSIS use InSilicoSpectro::InSilico::MassCalculator; InSilicoSpectro::InSilico::MassCalculator::init(insilicodef.xml); MassCalculator Perl library is intended to support common mass...


Platforms: *nix

Optimization Algorithm Toolkit is a workbench and toolkit for developing, evaluating, and playing with classical and state-of-the-art optimization algorithms on standard benchmark problem domains; including reference algorithm implementations, graphing, visualizations and much more. The project...


Platforms: *nix

Bio::LiveSeq::Translation is a translation class for LiveSeq. This stores informations about aminoacids translations of transcripts. The implementation is that a Translation object is the translation of a Transcript object, with different possibilities of manipulation, different coordinate...


Platforms: *nix

Bio::Graphics::Glyph::cds module contains the "cds" glyph. SYNOPSIS See L< Bio::Graphics::Panel > and L< Bio::Graphics::Glyph >. This glyph draws features that are associated with a protein coding region. At high magnifications, draws a series of boxes that are color-coded to indicate the...


Platforms: *nix

Bio::Network::IO::dip_tab is a Perl class for parsing interaction data in DIP tab-delimited format. SYNOPSIS Do not use this module directly, use Bio::Network::IO. For example: my $io = Bio::Network::IO->new(-format => dip_tab, -file => data.dip); my $network = $io->next_network; The...


Platforms: *nix

NeoBio project consists of Bioinformatics algorithms in Java. What algorithms? The current version consists mainly of (pairwise) sequence alignment algorithms such as the classical dynamic programming methods of Needleman & Wunsch (global alignment) and Smith & Waterman (local alignment)....


Platforms: *nix

What does Folding@Home do? Folding@Home is a distributed computing project which studies protein folding, misfolding, aggregation, and related diseases. We use novel computational methods and large scale distributed computing to simulate timescales thousands to millions of times longer than...


Platforms: Mac

FoldingObserver gives you a simple possibility to monitor your Folding@Home clients within your network. You can keep track of lots of details of your clients. Features include:Shows all details of your clients in a convinient, sortable overviewHighlights clients with high progressAdd clients to...


Platforms: Mac

CLC Free Workbench is the foundation for all bioinformatics workbenches from CLC bio. This software package is a community edition, available for download free of charge.The workbench creates a software environment enabling users to make basic bioinformatics analyses and smooth data management,...


Platforms: Mac

'FoldIt light' is a molecular modelling program to visualize and manipulate interactively protein structure files from the Brookhaven Protein Data Bank (PDB). It's an integrated environment allowing 3D manipulations as well as statistical analysis.


Platforms: Mac

Geneious Basic is your personalized library of genomic and genetic data; that provides a fully integrated, visually advanced toolset for:Sequence alignment and phylogeneticsSequence analysisBLAST, Protein structure viewing, NCBI, EMBL, Pubmed auto-find & moreAPI for creating your own plugins...


Platforms: Mac

ChemSpotlight is a Spotlight metadata importer plug-in that reads common chemical file formats (MDL .mol, .mdl, .sd, .sdf, Tripos .mol2, Protein Data Bank .pdb, Chemical Markup Language .cml, and XYZ). It indexes chemistry files, adds molecular formulas (complete with subscripts in the Finder),...


Platforms: Mac

Food Exchange Diet Planner is a tool to be used by food professionals and knowledgeable individuals to create and test diet plans based on the food exchange scheme. To create a dietary plan using the "food exchange diet planner" (this program), one needs to follow three steps: (a) Define...


Platforms: Windows, Windows 7, Windows Server

Geneious is a useful, unique and easy-to-use software system which has been designed to greatly speed up and simplify the research in molecular biology and biochemistry. Geneious is a cross-platform research engine for the retrieval, organization and analysis of biomolecular data that allows...


Platforms: Windows

The FastPCR software was developed to be an integrated tools environment that provides comprehensive facilities for designing primers for most PCR applications including standard, long distance, inverse, real-time, multiplex, unique and group-specific; overlap extension PCR (OE-PCR)...


Platforms: Windows, XP, 2003, Windows Vista, XPX64, 7, 7x64

Geneious is a useful, unique and easy-to-use software system which has been designed to greatly speed up and simplify the research in molecular biology and biochemistry. Geneious is a cross-platform research engine for the retrieval, organization and analysis of biomolecular data that allows...


Platforms: Windows