Phylogenetic Analysis

A modular software framework for phylogenetic analysis and visualization. Existing phylogenetic software can be split into two groups. Algorithmic packages that provide computational methods for a specific problem, and visualization tools to analyze results. Many algorithmic tools lack in...

FFP (Feature frequency profile) is an alignment free comparison tool for phylogenetic analysis and text comparison. It can be applied to nucleotide sequences, complete genomes, proteomes and even used for text comparison. Features . Comparison of Genomes, protein and nucleic acid sequences...

PyElph is an application specially designed for gel image analysis and phylogenetics. Now you can use this simple and accessible Python-based tool to explore all the images you need.


Platforms: Windows

A set of programs for multiple sequence alignment and analysis. The programs use an expandable user interface which allows the addition of external analysis functions without any rewriting of code. The system supports several data types, nucleic and amino acid sequences, text, and masking...


Platforms: Mac

Bayesian hierarchical clustering methods provide a powerful tool for phylogenetic analysis, linguistic research and hierarchical clustering in general such as applied in marketing, political science, customer preference grouping etc. Bayesian methods use MCMC sampling which results in a large...


Platforms: Mac

Bio::Phylo::Manual is a Perl module that contains a Bio::Phylo v.0.14 user guide. This is the manual for Bio::Phylo. Bio::Phylo is a perl5 package for phylogenetic analysis. For installation instructions, read the README file in the root directory of the distribution. The stable URL for the...


Platforms: *nix

Mesquite is software for evolutionary biology, designed to help biologists analyze comparative data about organisms. Its emphasis is on phylogenetic analysis, but some of its modules concern population genetics, while others do non-phylogenetic multivariate analysis. Because it is modular, the...


Platforms: Mac

Stock Price Analysis provide a free web based stock price analysis module. The easy to use interface incorporates Fundamental Analysis to calculate: Fair Value stock price; comparative stock Value; profit Target sell price; Stop Loss sell price; Price Earnings Ratio (PE) for Fair Value and Buy...


Platforms: Windows, Mac

BASE is the Basic Analysis and Security Engine. It is based on the code from the Analysis Console for Intrusion Databases (ACID) project. This application provides a web front-end to query and analyze the alerts coming from a SNORT IDS system. BASE is a web interface to perform analysis of...


Platforms: *nix

Market Analysis System (MAS) is an open-source software application that provides tools for analysis of financial markets using technical analysis. Market Analysis System provides facilities for stock charting and futures charting, including price, volume, and a wide range of technical analysis...


Platforms: *nix

Directory Analysis Tool is used to analyze LDAP directories and report on their contents. Useful if you want to find inactive accounts, people who havent changed passwords, or who has administrator privileges..


Platforms: *nix

TA-Lib provides common functions for the technical analysis of stock/future/commodity market data. TA-Lib can be reused by trading software developers using Excel, .NET, Java, Perl or C/C++.. Technical analysis open-source software library to process financial data. Provides RSI, MACD,...


Platforms: *nix

Statistical Traffic Analysis Kit is a set of command-line traffic analysis tools, designed to help a network administrator to see what is happening at a router at the moment. Unlike tcpdump (1), the stak set uses statistical and stream-oriented methods, and will rarely produce an output stream...


Platforms: *nix

The Analysis & Reconstruction Sound Engine also known as ARSE, is a program that analyses a sound file into a spectrogram and is able to synthetise this spectrogram, or any other user-created image, back into a sound. The ARSE consists in two main parts, a spectrographer with a base-2...


Platforms: *nix

Plucene::Analysis::PorterStemFilter - Porter stemming on the token stream. SYNOPSIS # isa Plucene::Analysis:::TokenFilter my $token = $porter_stem_filter->next; This class transforms the token stream as per the Porter stemming algorithm. Note: the input to the stemming filter must...


Platforms: *nix

Sequence Analysis project is a collage of coding projects which I have written over the past several years for various clients in my work as a bioinformatics consultant. These clients have graciously allowed me to release these works into the public domain as freeware for Macintosh OS X in...


Platforms: *nix

AutoFEM Analysis Lite is a free system of finite-element analysis. The main feature of the system is its deep integration with AutoCAD. Using AutoFEM Analysis Lite each user of AutoCAD gets possibility to solve the problems of finite-element modeling of various physical phenomena: - static...


Platforms: Windows

Rocket Propulsion Analysis (RPA) is a multi-platform rocket engine analysis tool for rocketry professionals, scientists, students and amateurs. For many years rocketry scientists, students and amateurs were using command-line MS-DOS or UNIX programs to calculate the performance of the rocket...


Platforms: Windows

Rocket Propulsion Analysis (RPA) is a multi-platform rocket engine analysis tool for rocketry professionals, scientists, students and amateurs. For many years rocketry scientists, students and amateurs were using command-line MS-DOS or UNIX programs to calculate the performance of the rocket...


Platforms: Windows

Cluster Sampling Analysis was specially designed in the Java programming language to help you compute your data. Now you can make use of this handy and accessible application to analyze your cluster samplings in no time at all.


Platforms: Windows