Nmr Spectroscopy

jVisualizer is a graphical tool to visualize and analyse first-order coppling patterns found in NMR-spectroscopy; additional you can type in chemical shifts from an experiment to calculate coupling constants

Wattos is a collection of mostly Java programs for Structural Biology and NMR Spectroscopy. It's programs analyze, annotate, parse, archive, and disseminate experimental NMR data deposited by authors world wide into the PDB and BMRB.

Returns NMR properties of the isotopesEXAMPLEH = isotopes('1H'), T = isotopes('3H'), or if the atomic mass is not specified, i.e. I = isotopes('H'), the function returns array of structures with data for all isotopes of the specified element. Isotopes('n') returns NMR properties for neutron....


Platforms: Matlab

nmr-relax is designed for the study of the dynamics of proteins or other macromolecules though the analysis of NMR relaxation data. It is a community driven project created by NMR spectroscopists for NMR spectroscopists. It supports exponential curve fitting for the calculation of the R1 and R2...


Platforms: *nix

The aim of the project is to provide open source collection of algorithms in the field of spectroscopy: data handling and processing, modeling and artificial intelligence tools.


Platforms: Windows, Mac, Linux

This is a set of scripts that helps with processing of NMR pH titration data. These scripts allow for fitting (using R) and plotting of data of multiple residues. The program needs to be made more user friendly.


Platforms: Windows, Mac, Linux

A computational method for quantitative analysis by multiwavelength absorption spectroscopy, called the Tfit method, based on fitting a model of the instrumentally-broadened transmission spectrum to the observed transmission data. It has the advantages of wider dynamic range and greatly improved...


Platforms: Matlab

This m-file plots a NMR coupling diagram from coupling constants and number of splits (only 1/2-spin nuclei). Useful for educational purposes.Example: plotcoupling([8,2],[3,1])Produces a plot with the coupling constants 8 and 2 Hz, splitted three and one times, respectively.The screenshot is made...


Platforms: Matlab

GMR returns the gyromagnetic ratio and other NMR properties for various nuclei as well as the electron.Besides the function format, the command format will work as well, e.g. "gmr Na23 hzpt 3.0".Format: y=gmr(nucleus,unit,b0) "nucleus" = string or number specifying the nucleus (not case...


Platforms: Matlab

The toolbox can import spectra acquired on spectroradiometers manufactured by Analytical Spectral Devices (ASD), Spectra Vista Corporation (SVC), Ocean Optics and the Field Spectroscopy Facility (FSF). It can post process spectra to calculate spectral reflectance, radiance and irradiance. It also...


Platforms: Matlab

Covariance NMR toolbox, version 1.1 (C) (2010)David A. Snyder(1) along with Timothy Short(1), Leigh Alzapiedi(1) and Rafael Bruschweiler (2)(1) Department of Chemistry, College of Science and Health, William Paterson University; (2) Department of Chemistry and NHMFL, Florida State UniversityThe...


Platforms: Matlab

A set of scripts, originally written to read in Siemens and Phillips format MR spectroscopy FIDs.Will navigate a file pointer through to the appropriate (group, element) tag in the file.


Platforms: Matlab

Interface to perform advanced searches based on Spotlight. Geared to NMR spectra and chemical files. A query can consist in a single condition or in multiple ones. Source code available.


Platforms: Mac

ChemToolBox, the swiss army knife of the lab worker, is a freeware which contains numerous scientific data very useful in a laboratory. Thanks to its own database, ChemToolBox will easily substitute to the time-consuming use of scientific books (such as Handbooks) or online databases....


Platforms: Windows

Freeware for optical spectroscopy. Easy to use, fast and reliable. Viewing optical spectra (UV/VIS, IR, NIR, Raman, fluorescence) from different sources. Supported data formats include ASCII, JCAMP-DX, Galactic SPC, Perkin Elmer, Varian Cary 50, Scinco Neosys 2000, Bio-Rad FTS 3000 MX, Agilent/HP...


Platforms: Windows

BrOxy is an open-source program used to analyse haemodynamic brain oxygenation from near-infrared spectroscopy data. It covers data import/export, filtering, correlation and multi-variate regression analysis, visualisation...


Platforms: Windows, Mac, Linux

cnsFace is a GUI for the Crystallography and NMR System.


Platforms: Windows, Mac, Linux

Janocchio is an application or applet for viewing 3D molecular structures and calculating NMR couplings and NOEs


Platforms: Windows, Mac, Linux

MatNMR is a highly flexible toolbox for processing 1D and 2D NMR/EPR spectra in MATLAB and creating high-quality 1D, 2D or 3D plots. Fully GUI and/or script-based.


Platforms: Windows, Mac, Linux

PAScual is a data analysis suite for Positron Annihilation Lifetime Spectroscopy (PALS).


Platforms: Windows, Mac, Linux