Mzxml
MRMer reads an mzXML file and infers precursor-ion/product-ion relationships. It displays elution curves of the product ions and allows the user to select or deselect them as candidates for MRM-based assays.
MRMer also displays the elution curve of the precursor ions when MS1 scans are present...
Platforms: Windows
License: Freeware | Download (456): MRMer Download |
A variation for Josh: Convert MS mzxml files to simple "RT m/z Intensity" TAB separated lines.
Platforms: Mac
License: Freeware | Size: 1.14 MB | Download (45): mz2tsv Download |
msInspect allows you to process and view mass spectrometry (MS1) data in an mzXML file.
You can use msInspect's built-in tools to inspect data, identify peptide features, generate peptide arrays using data from multiple runs, and export data to external applications for further analysis and...
Platforms: Windows
License: Freeware | Download (389): msInspect Download |
PRIDE Converter converts mass spectrometry data from most common data formats into valid PRIDE XML for submission to the publicly available PRIDE database. It presents a convenient, wizard-like graphical user interface, and includes efficient access to the Ontology Lookup Service (OLS). The...
Platforms: Mac
License: Freeware | Size: 15.14 MB | Download (45): PRIDE Converter Download |
mMass presents open source multi-platform package of tools for precise mass spectrometric data analysis and interpretation. It is written in Python language and released under GNU General Public License, so it's portable to different computer platforms and has a good potential to be easily...
Platforms: Mac
License: Freeware | Size: 32 MB | Download (437): mMass for Mac Download |
mMass presents open source multi-platform package of tools for precise mass spectrometric data analysis and interpretation. It is written in Python language and released under GNU General Public License, so it's portable to different computer platforms and has a good potential to be easily...
Platforms: Windows
License: Freeware | Size: 17 MB | Download (418): mMass Download |
mMass presents open source multi-platform package of tools for precise mass spectrometric data analysis and interpretation. It is written in Python language and released under GNU General Public License, so it’s portable to different computer platforms and has a good potential to be easily...
Platforms: Linux
License: Freeware | Size: 1024 KB | Download (415): mMass for Linux Download |
Spectre for mass spectrometry. (Quantitiave) analysis of multiple ls-ms(ms) runs, using mzXML import of raw data. (working on mzDATA). Provides filters, alignment- and export tools.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 3.62 MB | Download (43): MS-Spectre: quantitative LC-MS analysis Download |