Gmod

Bio::GMOD::Admin::Monitor::blat is a Perl module that can monitor a BLAT server. SYNOPSIS Check the installed version of a MOD use Bio::GMOD::Util::CheckVersions.pm my $gmod = Bio::GMOD::Util::CheckVersions->new(-mod=>WormBase); my $version = $gmod->live_version; Update a MOD installation...


Platforms: *nix

Bio::GMOD is a unified API for Model Organism Databases. SYNOPSIS Check the installed version of a MOD use Bio::GMOD::Util::CheckVersions.pm my $mod = Bio::GMOD::Util::CheckVersions->new(-mod=>WormBase); my $version = $mod->live_version; Update a MOD installation use Bio::GMOD::Update;...


Platforms: *nix

GMOD-DBSF is an Application Programming Interface module for the Drupal CMS which simplifies programming bioinformatic Drupal modules. It is responsible for i) importing a subset of the Chado tables to Drupal, ii) creates new tables in Drupal using Chado-conventions; iii) provides functions to...


Platforms: PHP

WormBase::Archive::Build can create archives of Wormbase releases. SYNOPSIS use Bio::GMOD::Admin::Archive; my $archive = Bio::GMOD::Admin::Archive->new(); $archive->create_archive(); METHODS Bio::GMOD::Admin::Archive->new(@options) Create a new WormBase::Archive object for archiving...


Platforms: *nix

GMOD is a set of interoperable open source software components for visualizing, annotating, and managing biological data. See http://gmod.org for more.


Platforms: Windows, Mac, Linux

Genes4all is a package of modules for visualizing bioinformatic information using GMOD, BioPerl and Chado. It depends on the gmod_dbsf module (http://drupal.org/project/gmod_dbsf) and is in active development. See also http://drupal.org/project/biosoftware_bench.Currently two (sub)modules are...


Platforms: PHP

IVCon-TL can read and write a variety of 3D graphics file formats, converting from one to the other. Supported formats include 3DS, ASE, BYU, DXF, GMOD, HRC, IV, OBJ, OFF, POV, SMF, STL/STLA/STLB, TEC, TRI/TRIA/TRIB, UCD, VLA, WRL/VRML, XGL and more.


Platforms: Windows, Mac, BSD, Linux

The Bioinformatic Software Bench for Drupal allows for a rapid and secure deployment of bioinformatic software. The BLAST, InterProScan, SSAHA2 and annot8r software are provided by default and plugins for new software can be readily written. An innovative graphical user interface guides both...


Platforms: PHP