General Petraeus Bio
Test your smarts with General Knowledge Quiz where you will be rewarded with fun and knowledge. There is nothing quite as worthwhile as improving your knowledge while you are having fun. As you play General Knowledge Quiz, you will find that you are not just being tested on your knowledge of the...
Platforms: Windows
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General SQL Parser is developed to help people who want to check syntax of SQL statements, pretty print out SQL statements,and parse SQL statements into a parse tree in their own program. It provides detail information about a SQL statement such as statement types (Select, insert, update, delete...
Platforms: Windows
License: Freeware | Size: 1.53 MB | Download (227): General SQL Parser Download |
Bio::Tools::Run::TribeMCL is a method for clustering proteins into related groups, which are termed protein families. SYNOPSIS use Bio::Tools::Run::TribeMCL; use Bio::SearchIO; # 3 methods to input the blast results # straight forward raw blast output (NCBI or WU-BLAST) my @params =...
Platforms: *nix
License: Freeware | Size: 829.44 KB | Download (213): Bio::Tools::Run::TribeMCL Download |
BS1 General Ledger tracks budget and actual financial data to produce financial statements such as an Income Statement and Balance Sheet, the Trial Balance report, and General Ledger (detail) report. Unlimited account grouping levels. All user errors can be easily corrected. Add AP, AR,...
Platforms: Windows, Windows 7, Windows Server, Other
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Bio::Tools::AlignFactory is a base object for alignment factories. SYNOPSIS You wont be using this as an object, but using a dervied class like Bio::Tools::pSW Holds common Alignment Factory attributes in place.
Platforms: *nix
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Bio::MAGE::Protocol::Software - Software represents the software used. SYNOPSIS use Bio::MAGE::Protocol::Software; # creating an empty instance my $software = Bio::MAGE::Protocol::Software->new(); # creating an already populated instance my $software =...
Platforms: *nix
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Bio::Restriction::Enzyme is a single restriction endonuclease (cuts DNA at specific locations). SYNOPSIS # set up a single restriction enzyme. This contains lots of # information about the enzyme that is generally parsed from a # rebase file and can then be read back use...
Platforms: *nix
License: Freeware | Size: 4.7 MB | Download (141): Bio::Restriction::Enzyme Download |
Bio::Tree::Tree is an implementation of TreeI interface. SYNOPSIS # like from a TreeIO my $treeio = new Bio::TreeIO(-format => newick, -file => treefile.dnd); my $tree = $treeio->next_tree; my @nodes = $tree->get_nodes; my $root = $tree->get_root_node; This object holds handles to Nodes...
Platforms: *nix
License: Freeware | Size: 4.7 MB | Download (136): Bio::Tree::Tree Download |
Bio::NEXUS::CodonsBlock is a Perl module that represents CODONS block in NEXUS file. METHODS new Title : new Usage : block_object = new Bio::NEXUS::CodonsBlock(); Function: Creates a new Bio::NEXUS::CodonsBlock object Returns : Bio::NEXUS::CodonsBlock object Args :.
Platforms: *nix
License: Freeware | Size: 153.6 KB | Download (133): Bio::NEXUS::CodonsBlock Download |
Bio::DB::Flat::BDB::swissprot is a swissprot adaptor for Open-bio standard BDB-indexed flat file. SYNOPSIS See Bio::DB::Flat. This module allows swissprot files to be stored in Berkeley DB flat files using the Open-Bio standard BDB-indexed flat file scheme. You should not be using this...
Platforms: *nix
License: Freeware | Size: 4.7 MB | Download (130): Bio::DB::Flat::BDB::swissprot Download |
Bio::AlignIO::bl2seq is a bl2seq sequence input/output stream. SYNOPSIS Do not use this module directly. Use it via the Bio::AlignIO class, as in: use Bio::AlignIO; $in = Bio::AlignIO->new(-file => "inputfilename" , -format => bl2seq); $aln = $in->next_aln(); This object can create...
Platforms: *nix
License: Freeware | Size: 4.7 MB | Download (129): Bio::AlignIO::bl2seq Download |
Bio::Tools::CodonTable is a bioperl codon table object. SYNOPSIS # This is a read-only class for all known codon tables. The IDs are # the ones used by nucleotide sequence databases. All common IUPAC # ambiguity codes for DNA, RNA and animo acids are recognized. # to use use...
Platforms: *nix
License: Freeware | Size: 4.7 MB | Download (127): Bio::Tools::CodonTable Download |
Bio::Map::CytoMap is a Bio::MapI compliant map implementation handling cytogenic bands. SYNOPSIS use Bio::Map::CytoMap; my $map = new Bio::Map::CytoMap(-name => human1, -species => $human); foreach my $marker ( @markers ) { # get a list of markers somewhere $map->add_element($marker); }...
Platforms: *nix
License: Freeware | Size: 4.7 MB | Download (124): Bio::Map::CytoMap Download |
Bio::ExtractNE::MakeDict is a package for creating dictionary. FUNCTIONS mkdict($input_file, $output_dictfile) This function creates named-entity dictionary. Note that $input_file is a hash. Currently, only SwissProt data is supported. mkdict({ sprot_file => "sprot", } => "sprot.dict");...
Platforms: *nix
License: Freeware | Size: 5.3 MB | Download (123): Bio::ExtractNE::MakeDict Download |
Bio::Affymetrix::CDF is a Perl module to parse Affymetrix CDF files. SYNOPSIS use Bio::Affymetrix::CDF; # Parse the CDF file my $cdf=new Bio::Affymetrix::CDF({"probemode"=>0}); $cdf->parse_from_file("foo.cdf"); # Find some fun facts about this chip type print...
Platforms: *nix
License: Freeware | Size: 64.51 KB | Download (120): Bio::Affymetrix::CDF Download |
Free jigsaw puzzle of General Lee's Ghost at Antietam. The picture was created using original photography. The depiction of Lee is a colorized photo of his statue at Antietam, superimposed into one of the battlefields, creating a ghostly image.
Platforms: Windows
License: Freeware | Size: 306 KB | Download (120): General Lee's Ghost Download |
Bio::Graphics::Glyph::minmax is the minmax glyph. SYNOPSIS See L< Bio::Graphics::Panel > and L< Bio::Graphics::Glyph >. This glyph is the common base class for Bio::Graphics::Glyph::graded_segments and Bio::Graphics::Glyph::xyplot. It adds an internal method named minmax() for calculating...
Platforms: *nix
License: Freeware | Size: 4.7 MB | Download (115): Bio::Graphics::Glyph::minmax Download |
Bio::Matrix::PSM::InstanceSite is a PSM site occurance. SYNOPSIS use Bio::Matrix::PSM::InstanceSite; #You can get an InstanceSite object either from a file: my ($instances,$matrix)=$SomePSMFile->parse_next; #or from memory my %params=(seq=>TATAAT, id=>"TATAbox1",...
Platforms: *nix
License: Freeware | Size: 4.7 MB | Download (115): Bio::Matrix::PSM::InstanceSite Download |
Bio::Tree::NodeNHX is a Simple Tree Node with support for NHX tags. SYNOPSIS use Bio::Tree::NodeNHX; my $nodeA = new Bio::Tree::NodeNHX(); my $nodeL = new Bio::Tree::NodeNHX(); my $nodeR = new Bio::Tree::NodeNHX(); my $node = new Bio::Tree::NodeNHX(); $node->add_Descendents($nodeL);...
Platforms: *nix
License: Freeware | Size: 4.7 MB | Download (114): Bio::Tree::NodeNHX Download |
Bio::SAGE::Comparison module compares data from serial analysis of gene expression (SAGE) libraries. SYNOPSIS use Bio::SAGE::Comparison; $sage = Bio::SAGE::Comparison->new(); This module provides several tools for comparing data generated from serial analysis of gene expression (SAGE)...
Platforms: *nix
License: Freeware | Size: 8.19 KB | Download (110): Bio::SAGE::Comparison Download |