Gene Tests

Otk Tests are tests for the Open Tool Kit project. Otk is a portable widget library for making graphical user interfaces for C programs. It emphasizes simplicity for the application programmer without eliminating capability. Based on OpenGL, Otk supports Linux, Unix, and other OSs neutrally and...

Test::Unit::tests::AllTests is a unit testing framework self tests. SYNOPSIS # command line style use perl TestRunner.pl Test::Unit::tests::AllTests # GUI style use perl TkTestRunner.pl Test::Unit::tests::AllTests This class is used by the unit testing framework to encapsulate all the...

Acme::Tests is a Perl module to see how much do you know. SYNOPSIS perl Makefile.PL make test This module is a "test software", it has tests in the software rather then software tests. Upon installation, you are reqruied to answered several question, and the installation would be only...


Platforms: *nix

GENE Graph Export Engine is an advanced XML exporter. GENE Graph Export Engine is a complex convertor/framework for multi-namespace XML transforming and exporting. It is able to convert various XML types including SVG, DocBook, MathML, XSL-FO, and their combinations into a wide area of output...


Platforms: *nix

This program is a parser that abstract a data structure from a given Entrez Gene record, and users of the parser can decide what to do/extract from the data structure. Perl Entrez Gene Parser project provides Perl parsers for NCBI's Entrez Gene based on regular expression, Parse::RecDescent,...


Platforms: Windows, Mac, *nix, Perl, BSD Solaris

The Daypo program is designed for create, edit, print, save, publish and share onlinee tests for e-learnig. You can create your own tests to learn yourself, for repeating until you memorice then, and the best, it's totally free. Your test can help other people who want to learn just like...


Platforms: Windows

The Daypo program is designed to create, edit, print, save, publish and share online tests for e-learning. You can create tests for yourself to help you learn, you can create tests for your kids, you can create tests for others. Create a test and publish it on the Daypo website. Your test can...


Platforms: Windows

Conrad is both a high performance Conditional Random Field engine which can be applied to a variety of machine learning problems and a specific set of models for gene prediction using semi-Markov CRFs.


Platforms: Windows, Mac, Linux

Disease Gene Profiler (DGP) comprises of a set of (bioinformatics) tools that can be used to identify the genes underlying susceptibility to common multifactorial diseases (such as diabetes, asthma and cancer) using freely available datasources.


Platforms: Windows, Mac, Linux

Perl Entrez Gene Parser project provides Perl parsers for NCBI's Entrez Gene based on regular expression, Parse::RecDescent, Parse::Yapp and Perl-byacc. Some can parse human genome annotations in minutes. Documentation and user guides are provided.


Platforms: Windows, Mac, Linux

The home of the Gene Ontology project on SourceForge, including ontology requests, software downloads, bug trackers, and much, much more.


Platforms: Windows, Mac, Linux

Gene-Environment iNteraction Simulator 2 (GENS2) simulates interactions among two genetic and one environmental factor and also allows for epistatic interactions. GENS2 is based on data with realistic patterns of linkage disequilibrium, and imposes no limitations either on the number of...


Platforms: Windows, Mac, Linux

GRaPe - a platform-independent software tool for building integrative gene-reaction-protein (GRP) networks. It generates the kinetic equations for each reaction and outputs a SBML document. It also implements two methods for parameter estimation.


Platforms: Windows, Mac, Linux

LiveGMS is a PHP/MySQL driven gene editor for the game Creatures 3 / Docking Station. It provides a platform independent online editor with most features other binary genetics editors have.


Platforms: Windows, Mac, Linux

Exceptions provide very handy ways of performing simple tests. This script uses IsInt() function to check if the content of a string contains an integer.


Platforms: Windows, Mac, *nix, Python, BSD Solaris

Let us assume the following MIMO model:Y(k)=HX(k)+Y(k)This file can detect the number of sources, i.e the size of the vector X(k) from the received signal Y(k). The noise is assumed spatially white and the number of receivers must be strictly greater than the number of sources. For more details...


Platforms: Matlab

a simple function that returns a colormap, C, for visualizing gene expression. C is just a N x 3 matrix [R G B] describing the range of color values.example usage: C = exp_colormap('blue-yellow',64); colormap(C);called without any arguments, it returns a [3 x 64] green-red colormap.options for...


Platforms: Matlab

This is a set of functions that allows to test the weak form market efficiency and thus the predictability of the time series returns through various tests: direct and indirect test.The direct tests are the two versions (individual and joint)of the variance ratio of Lo and MacKinlay (1988).The...


Platforms: Matlab

This script uses the gene name field(s) in a table downloaded from the UCSC Genome Browser to add gene names to an existing SVS marker map saved in the DSM file format. Note: Though the following instructions specify downloading a table containing genes based on the Mar. 2006 (NCBI36/hg18) Human...


Platforms: Mac

Build a gene network! The lac operon is a set of genes which are responsible for the metabolism of lactose in some bacterial cells. Explore the effects of mutations within the lac operon by adding or removing genes from the DNA. Sample Learning Goals: * Predict the effects on lactose...


Platforms: Mac