Dna Molecule Structure

PDBRead is a function that will read a Protein Data Bank file into a MATLAB structure.PDB_struct = PDBRead(filename) reads the file corresponding to filename and stores the information contained in this file in the PDB_struct. e.g. PDB_struct = PDBRead('PDBSilk.txt')The file that is being read by...

JBoss DNA is a repository and set of tools that make it easy to capture, version, analyze, and understand the fundamental building blocks of information.As models, service and process definitions, schemas, source code, and other artifacts are added to the repository, JBoss DNA "sequences" the...

GraphViz::Data::Structure can visualise data structures. SYNOPSIS use GraphViz::Data::Structure; my $gvds = GraphViz:Data::Structure->new($data_structure); print $gvds->graph()->as_png; This module makes it easy to visualise data structures, even recursive or circular ones. It is...


Platforms: *nix

This 30 days fully functional demo of CLC DNA Workbench provides a wide range of advanced DNA sequence analyses, and is based on the same user-friendly and integrated software environment as CLC Free Workbench. Some analyses are: - Assembly of DNA sequencing data - Graphically and...


Platforms: Mac

Dependency Structure Matrices (DSMs) are very useful in the analysis and verification of software architectures because they allow the analyst to more easily understand inter-module dependencies than traditional box and arrow techniques which become impossible to use for all but the simplest...


Platforms: Windows, ASP.NET,

This structure is a kind of dictionary which allows you to map data intervals to values. You can then query the structure for a given point, and it returns the value associated to the interval which contains the point.Boundary values don't need to be an integer ; in the test unit a date-time...


Platforms: Windows, Mac, *nix, Python, BSD Solaris

This script implements the Union Find data structure and algorithm. This data structure allows one to find out which set an object belongs to, as well as join two sets. The algorithm's performance, given m union/find operations of any ordering, on n elements has been shown to take log* time per...


Platforms: Windows, Mac, *nix, Python, BSD Solaris

This code optimises the parameters for the term structure of volatility (TSOV) applied to historical forward curves - see discussion in Harris in reference 1 below. TSOVs avaible are: TermType - 1 = sigma = A exp (-CT) - 2 = sigma = A exp (-CT) + D - 3 = sigma = (A + BT) exp (-CT) + DRequired...


Platforms: Matlab

PHP Tree Structure stored in MySQL database is a php script to store and manipulate tree structure in a mysql database, is a free PHP code generator.An example of a typical uses for this would be a web directory. Its important to note that the script and the table are meant only to...


Platforms: PHP

Backup database structure accesses a given MySQL database and generates files with SQL statements that can be used later to restore the database structure and data in the database.The database dump file can optionally be saved in a compressed format in order to minimize its size.


Platforms: PHP

Database structure synchronizer then generates the SQL statements required to update one of the database to the other.Database structure synchronizer determines what changed from one database to the other and generates schema alteration SQL statements to create, drop and alter tables that should...


Platforms: PHP

MySQL Structure Magic can analyze the schema of a MySQL database and export it as a PHP array definition or in a XML format. Previously exported schema definitions can also be imported.With an initial and final schema definitions MySQL Structure Magic can compare them and determine the necessary...


Platforms: PHP

Minecraft Structure Planner is a companion application for the insanely popular sandbox game Minecraft. The Structure planner allows anyone to quickly and easily create a variety of structures for building in the game, Structures are defined using a simple set of number fields, texture...


Platforms: Mac

APM Structure 3D is the light version of component for strength and dynamic analysis of parts and structures by finite element method. It is a useful utility for engineers and technical designers. APM Structure 3D is a universal system intended to perform complex analysis and design of rod,...


Platforms: Windows

Structure is a screensaver for Mac OS X that draws on the National Center for Biotechnology Information's protein databases to display beautiful 3D protein structures on your screen. It ships with about ten sample structures and via the Internet has seamless access to a database of tens of...


Platforms: Mac

JMotifFinder is a small, simple, easy to use application designed to offer users a graphical utility to find DNA Motifs such as Primers in huge EMBL Files. If you load an EMBL file containing exon and mRNA information into JMotifFinder, it will graphically display the location of the exons and...


Platforms: Windows

SketchEl is an interactive chemical molecule sketching tool, and molecular spreadsheet data entry application. The feature set provided by the molecular sketcher is largely limited to the minimum features required to conveniently edit diagram representations of small molecule structures....


Platforms: Windows

Main Workbench includes all features from CLC DNA Workbench, CLC RNA Workbench, and CLC Protein Workbench, as well as a range of Gene Expression Analysis. CLC Main Workbench creates a software environment enabling users to make a large number of advanced protein sequence analyses, combined with...


Platforms: Windows, XP, Windows Vista, XPX64, 7, 7x64

A protein / macromolecule visualization tool that runs as a screensaver module. It colorfully renders PDB (Protein Data Bank) files using unique algorithms. The module automatically annotates, colors, and rotates structures for an educational and captivating display. Show off your research or...


Platforms: Mac

Wild-DNA Slide Show: simple picture slide show using pixel shaders 2.0 to display your pictures with cool effects.


Platforms: Windows