Cellular Respiration Experiments
LabDiary is a program for managing laboratory experiments in a sophisticated way. It is very easy to use - you can link experiments logically with each other, associate files to an experiment and structure all your data.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 143.73 KB | Download (47): LabDiary Download |
A python package that allows scientists to easily create configurable and reusable experiments. Intended for use with the LabRAD framework. Developed by the Haeffner group studying quantum simulation at UC Berkeley. Wiki at lrexp.wikispaces.com
Platforms: Windows, Mac, Linux
License: Freeware | Size: 27.62 KB | Download (51): LabRAD Experimenter Download |
ELGE - Environment for language games experiments.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 269.22 KB | Download (48): Language games simulation environment Download |
This project houses software to analyze data acquired from electrophysiology experiments. Currently, we have an Octave/MATLAB program to analyze electroneurogram traces of coupled oscillators, and a Perl library for the analysis of voltage trace data
Platforms: Windows, Mac, Linux
License: Freeware | Size: 70.94 KB | Download (45): Libraries for electrophysiological data Download |
Maple Tree is a Java based visualization tool used by researchers in the biological sciences to visualize and graphically browse the results of analyses of gene expression data collected from microarray experiments.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 1.17 MB | Download (46): Maple Tree Download |
MASyV, which stands for Multi-Agent System Visualization, was developed to facilitate the visualization of cellular automata, or agent-based or individual-based models, without the need for the user to actually implement a graphical user interface (GUI). The software employs a client-server...
Platforms: Mac
License: Freeware | Size: 419.84 KB | Download (49): MASyV Download |
Metmask is a tool written in python for managing chemical identifiers for metabolomics experiments. It can incorporate identifiers from local textfiles, several online databases, query PubChem and record all found associations in a local sqlite database.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 4.26 MB | Download (43): metmask Download |
The class libraries here provide infrastructure for creating simulations of low energy nuclear physics experiments, as well as some useful working programs that do simple simulations and analysis of experiments performed with magnetic spectrographs.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 1.3 MB | Download (46): Nuclear Simulation Java Class Libraries Download |
Open2Dprot is an open-source proteomics project for the development of bioinformatic tools for n-dimensional protein expression data analysis of quantified protein expression across multiple samples from research experiments.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 7.52 MB | Download (45): Open2Dprot Download |
openBmap collects data and provides open maps and statistics of all communicating objects: cellular antennas, wifi hotspots.
All softwares from back-end to client are open-source under AGPL v3 license.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 80.97 KB | Download (49): openBmap Download |
PyExPsiN is a Python crossplatform (Linux/Windows) module for made easy writing psychological experiments. Right now includes functions for DMTS (Delayed Matching to Sample), N-Back, Spatial N-Back, 'Grammatical', Mixed Dots, Stroop, and more.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 9.09 MB | Download (43): PyExPsiN Download |
PEACH provides C++ functions for programming experiments in visual psychophysics. PEACH contains an extensive collection of visual primitives as well as a set of experimental functions, which allow to code a complicated experiment in a few dozen lines.
Platforms: Mac, Linux
License: Freeware | Size: 634.38 KB | Download (45): PEACH Download |
an experimentation page for art made with Processing
Platforms: Windows, Mac, Linux
License: Freeware | Size: 22.03 MB | Download (45): Processing Experiments Download |
RADlab needs your donations!! Features: * Radiation Detection Experiments * Gamma, beta, alpha and neutron sources * Coincidence Experiment * NIM module and instrumentation * Easy setup
Platforms: Mac
License: Freeware | Size: 1.12 MB | Download (70): radlab Download |
An elementary cellular automaton simulator using a glider-based model to easily identify and insert gliders and repeating patterns.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 214.83 KB | Download (44): Rule Download |
SysGenSIM is a bioinformatics toolbox to create artificial gene expression datasets by simulating Systems Genetics experiments.
Platforms: *nix
License: Freeware | Size: 225.28 KB | Download (49): SysGenSIM Download |
NOMAD is a system for supporting microarray experiments. it facilitates the archival and retrieval of experiment results, and is being developed to provide integrated analytical tools.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 458.85 KB | Download (44): UCSF NOMAD Download |
In silico experiments. Express Taverna's workflows using XQuery. Integrates with Taverna, provides automated XQuery generation from SCUFL. A standard Taverna processor that runs XQuery. Easy XML transformations inside Taverna workflows.
Platforms: Windows, Mac, Linux
License: Freeware | Size: 2.28 MB | Download (43): XQTav Download |
Some scenarios for neuroinformatics experiments are saved in standard XML document. This program should be able to parse almost any scenario so far to make a full-valuable RDF file, where every pieces of scenario has their own URI.
This project is from University of West Bohemia in Czech...
Platforms: Windows, Mac, Linux
License: Freeware | Size: 9.68 MB | Download (55): zswi2012-6_transformace_XML_do_RDF Download |
It can quickly process data and to visualize changes in fluorescence; or it can be used to complete multiple analyses of the data obtained in several experiments.Different spatial and temporal filters, as well as correction for bleaching can be applied. The outputs consist in fluorescence time...
Platforms: Windows, Mac, *nix, Matlab, BSD Solaris
License: Freeware | Download (56): OpenFluo Download |